Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3307 ATGGACTCCTTCTTCGTCAACTCTTTGTATACTGTTTCTCCTCAACTAACTATTTCGCCGCGAATCAAGCAGAATAATGTACGGCGATTGCGAATTTCGAGTTTTGCTGCTACGACGGGAAATTCTGCTAAAAACGGCGCCGTTTTGAGACCGTTGCAGCTGCCAAGTAACTCCAGGTCGAATAACAGTGCGTTAGAGCAACTTGATATTGAGCGTGGTGTTTGCATCCCTTTCCGCAAGTACTCACCTGAAAGTGTGAGGAATAAGGTACTAGAATCAAGAGGAGCTATTTTGTCTCTAATTTCACGAGGAGTGGAGATAGTTTTGAGTCTGGGTTTGTATTGGTCTGCCTTGGTGTATGATTTCCTAGTTGGAAGGGATGAAGAAGTTGTTCCATTTCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCATCCTTTATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCAGATATCATTAGAGAAGATTATATGAGTGAACTTTGCATTCTTCAAGATGACGTCCCTTCATTTCCAAATGAAATTGCCTTCAGTATCATAGAGGAAGAACTGGGTCAGCCCCTTGAAGCTGTTTTCAGCAGAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACCGTGCAACTTTACGTGCCACTGGCGAGGATGTTGCTATAAAGGTTCAAAGGCCTGAGATAGAGCCCATAATTTATCGAGATCTTTTCCTGTTTCGCACTTTAGCTTCATTCCTAAATGGCATCAGTATACAGAAACTAGGGTGTAATGCTGAGCTGATTGTTGATGAATTTGGGGAAAAGCTTTTGGAAGAGCTTGACTATACACTGGAAGCCCGCAATATTGAAGATTTTCTTGAAAATTTTAAAGATGACCCCACCGTCAAAATCCCTATGGTTTACAAACAACTTTCTGGGCCACGTGTATTAGTGATGGAATGGATTGATGGTATTAGGTGCACCAATCCACAGGCCATTAAAGAAGGCGGTATTGATCTAGATGGGTTTCTAACAATTGGTGTGAGTGCTGCCCTTCGACAGTTGTTGGAATTTGGATTATTTCACGGAGACCCTCACCCCGGAAATATTTTTGCCATGCGTGATGGACGGATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTTAGTCAGCAAAATAAACAGATTTTAACTGATGCTGTTGTACATGCTGTGAATGAAGACTATACTGAGATGGCTAATGATTTCACCAGATTAGGCTTCCTGGCAGCAGGGACTGATGTCTCTCCAATAGTTCCTGCTTTAGAAGCAATTTGGCAGGACTCTGCTGGAAAAGGATTGGCAGATTTTAATTTTCGTAGTGTCACCGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATCCCAGAAAGGTTTTCACTTGTAATCCGTTCTTTATTGACTCAAGAAGGCATCTGTTTTACTTTGAAGCCTGACTTCAAATTTCTCGAGGTTGCCTATCCATATGTGGCTAAGCGACTACTAACAGATCCAAATCCAGCTCTACGTGAACGACTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAACGTGGCCAAGATGAGCAGCAATCCAGCATTGGCAGTGAAAAACAAGCAAACCCAGAGAAACTGGAAAGTTGAAAAAAAACTGGACCTTACAGACACAATCAAAGACGGAGCTCGCCTTTTCCTTGTCGACGAAGGAATCCGCCGACAGCTTCTTCTTGCTTTAACCGAGGACTCAAAGCTTCATATAGAAGAGCTTGTCGATGTGTATAGGTTGGTTGAAGATCAGATAGATATACCCTCAGTGGCCGTAGAAGTAGTTCGAGACTTCCCAACTGTTGCCAGGGATCTCCTACTTTCATGGAGCGAGTCCGTTTTATCTGATAGGTAG 1977 0.4294 MDSFFVNSLYTVSPQLTISPRIKQNNVRRLRISSFAATTGNSAKNGAVLRPLQLPSNSRSNNSALEQLDIERGVCIPFRKYSPESVRNKVLESRGAILSLISRGVEIVLSLGLYWSALVYDFLVGRDEEVVPFRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMSELCILQDDVPSFPNEIAFSIIEEELGQPLEAVFSRISSETIAAASLGQVYRATLRATGEDVAIKVQRPEIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKDDPTVKIPMVYKQLSGPRVLVMEWIDGIRCTNPQAIKEGGIDLDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILTDAVVHAVNEDYTEMANDFTRLGFLAAGTDVSPIVPALEAIWQDSAGKGLADFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSSNPALAVKNKQTQRNWKVEKKLDLTDTIKDGARLFLVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVVRDFPTVARDLLLSWSESVLSDR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3307 658 CDD ABC1_ADCK3-like 174 420 - -
Tpr1g3307 658 Gene3D Transferase(Phosphotransferase) domain 1 202 409 - -
Tpr1g3307 658 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 23 658 - -
Tpr1g3307 658 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 23 658 - -
Tpr1g3307 658 SUPERFAMILY Protein kinase-like (PK-like) 175 392 IPR011009 -
Tpr1g3307 658 Pfam ABC1 atypical kinase-like domain 174 418 IPR004147 -
Tpr1g3307 658 ProSiteProfiles Protein kinase domain profile. 204 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3307 Tpr-Chr1 37467490 37476249 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3307 - - gmx:100790292 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3039 3 32876956 32893968 Tpr1g3307 1 37467490 37476249 PCT