Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3300 ATGCAACCCCAACAGAGTTCGAGAATTGATTTGGGTGAGTTGAAAATACAGATTGTAAAGAAGATTGGACCGGATAAGTCGAAGCGGTACTTTTATTACCTTAACAGGTTTTTGAGTCAGAAGTTGAGCAAGAATGAGTTTGATAAGTTATGTTTTCGGCTAGTCGGGAGGGAGAACCTTCCGTTGCACAATCATTTTATAAAGTCGATTTTGAAGAATGCCTGCCAAGCCAAGACCCCGCCATCAGTTCATCCGTCCGGTTCTTCAAAATCAGGAGCACATGTTACTAATTTGTCTCCTGGTAGAGAAGATGGACACGAACAAAGTGCTGCTAGCTTTCAAAATCATAATGCTTCCATTTGGTCAAATGGGGTTTTGCCGGTGTCACCGCGTAAGTTACGGTCGGTAGTGCGGGAGCGGAAGCTTAAAGACAGACCGAGTCCACTTGGACCAAATGGGAAAGTTGATTCTGTTGGTCATCAATACACAGCGACAGAAGACAGTGGTAGTAAGGTTGACTTGGAGAATGGAACTCTTACTCCATGCGATTATCAGCGACCAACACAGCATCTTCAAGCAGTTTCTGAGCTACCCGAGAATGTTATACAGGGGCTTGCCGAAAAAACAAGAATGCGTGGCAAAGGGCCGACTGAAATATCAACCGTGGAAGATGGTGAGGAGTTGGAGCAATTAAACCGCCTCAATTTTGCAAAAAATCCGCTCGTAGCACCACTCGGGATTCCTTACTGCTCTGCAAGTGTGGGTGGGGCCCACAAATCATTGCCTGTGAATAGCACTGGTGATTATGTTAGTTGTAGTGACAGTGGTAGATTATCTGATACAGATACGTTGACAAGGCGCATGGAGCAGATTGCAATGGTACAGGGTCTTGGAGGTGTTTCCACGGAATGTGCAAGTATGTTGAATAGCGTGTTAGATGTGTACTTGAAACGGTTGATCAAGTCGTGTGTTGATTTAGTAGGGTCTCGGTCAGCAAATGAGCCGACAAAGCTGCCAAACTCAAAGAAGCAGATTCAAGGGAAGCTCATAAATGGCATGTTGCAACATAATCATTTACATTCGCAGAATTCTGGCAGGTTGACAGAATCTGAGCCAGAACACAGAACCCAATTCTCGGTATCTTTGCATGATTTTAAAGTTGCGATGGAGCTAAATCCACAGCAACTTGGAGAAGATTGGCCGCTACAATTGGAGAAAATCTCTATGAAATCTTTTCAGGAATAA 1245 0.4426 MQPQQSSRIDLGELKIQIVKKIGPDKSKRYFYYLNRFLSQKLSKNEFDKLCFRLVGRENLPLHNHFIKSILKNACQAKTPPSVHPSGSSKSGAHVTNLSPGREDGHEQSAASFQNHNASIWSNGVLPVSPRKLRSVVRERKLKDRPSPLGPNGKVDSVGHQYTATEDSGSKVDLENGTLTPCDYQRPTQHLQAVSELPENVIQGLAEKTRMRGKGPTEISTVEDGEELEQLNRLNFAKNPLVAPLGIPYCSASVGGAHKSLPVNSTGDYVSCSDSGRLSDTDTLTRRMEQIAMVQGLGGVSTECASMLNSVLDVYLKRLIKSCVDLVGSRSANEPTKLPNSKKQIQGKLINGMLQHNHLHSQNSGRLTESEPEHRTQFSVSLHDFKVAMELNPQQLGEDWPLQLEKISMKSFQE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3300 414 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 327 IPR024738 GO:0070461
Tpr1g3300 414 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 1 414 - -
Tpr1g3300 414 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 414 IPR024738 GO:0070461
Tpr1g3300 414 MobiDBLite consensus disorder prediction 77 111 - -
Tpr1g3300 414 MobiDBLite consensus disorder prediction 139 160 - -
Tpr1g3300 414 MobiDBLite consensus disorder prediction 77 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3300 Tpr-Chr1 37401201 37404197 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3300 - - gmx:100803746 659.062