Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3295 ATGGCAACAAAACCTAAAGATAGTAGCACAGTTGTTGGGAATGAGAAAAAGAAGACCCCATCTTCTAATTCTCCCCTCACAACAGCCAAAAGGACTACAAAACCATCCACAACAGCAGCAGCAGCAGCAGCAACAACAACAACAAGAACTACCCCCACAACCAACAAGAGTAACTCAACCACTCCATCAGAGAAAAACAAGCCCACAACAAGTATCAGAAAGCCCAAAACTGAGAGTCCAATTAAGCCTTCTCCAATTAGAAGAAGATCATTGGATAAACCACTTTCATCTTCAAACTTAACAGTAAAAACAACACAACCATCAACTTCAAGATTACACAAAGCCCTTGTTTCCCCGGGCACTAGAGAAAGCACCAACCCTTTAAAACCCATTTCAGATAAGACACCAAGTGATGCAAAAACTAAGCTAGTATGGAAAAGGGCCACAAAGAAGATCAACACCCCTAATAACAACATTGCTACTTCTAACACCACAAAGAAGGTGGCTAATGATCATACTTCTTCTGCTAACCCTGCAAAGACCAAAACTGTGATTACAGATTCTGATTCATCAAATGTTAAAACTGTGGATGTTAAAGAAGTTACAAACCAAGAAGCTGAAGTGATAAAAGTGGAGAGTAAAGAACATGCATCTAAGGTGATTTCACCTGATGTAAACAAGGAATTTGTACATGAGCATGAACATGATAAGGTTCTTAAGGATTCTGACCAACCTCAGAATCAAGGTGATGATGAGAAAGTAATTTCTACAGTTACAGAAGAAATAGCAGAAAAGGAGCCACAAGAAGAGAAACCTGAAGTTGAGCATGAAGTGAAACAGACCAATAGTGAGAATCACCCAGGAGAAGTAGATCATTCTGAAATTGAAAGGGAAGTTGCTGCGAATGAAAAGGAAGAAAATGAAAGTGGGGTTGTAATAGAAGATCAAAAAAGTGACAACAATAGTGAGAATCACCGAAAAGAAGTTGATCATTCTGAGGTTGAAAGGGAAGCTGCTGTGAATGAAAAGGAAGAAAATAAAAGTGGGATTGTATTAGAAGATCAAAAAAGTGAGAACAACAATGAAGATAAACCTCAAGTTGAGCATGAACAGAAACAGAACAATAGTGAGAATCACCAGGAAGAAGTTGATCATTCTGAGGTTGAAAGGGAAGCTGCTGCAAATGATAAGGAGGAAAATGAAAGTGGGATTGTAATAGAAGATAAAAAAAGTGAGAACAACAATGAAGAACGGGGAGGGGAAGAGAAGGAAGCTGTTGAAGGAGAGGTAAGTGAAGAAGTTAAAGAAGCTAAGGCTGAGGTAGCACAACCAAAGCAACAATTAGCAGCAAAAGGGAAGCATGAATCTCAAGTGTCTAATGATATGATTGAGGAGACTGCAACCAAGCTGTTGGGGAGGAAGAACAAGGTTCTTGCATTGGCTGGAGCATTTCAAACTGTCATTGATCATCAAGGCAAATGA 1482 0.3927 MATKPKDSSTVVGNEKKKTPSSNSPLTTAKRTTKPSTTAAAAAATTTTRTTPTTNKSNSTTPSEKNKPTTSIRKPKTESPIKPSPIRRRSLDKPLSSSNLTVKTTQPSTSRLHKALVSPGTRESTNPLKPISDKTPSDAKTKLVWKRATKKINTPNNNIATSNTTKKVANDHTSSANPAKTKTVITDSDSSNVKTVDVKEVTNQEAEVIKVESKEHASKVISPDVNKEFVHEHEHDKVLKDSDQPQNQGDDEKVISTVTEEIAEKEPQEEKPEVEHEVKQTNSENHPGEVDHSEIEREVAANEKEENESGVVIEDQKSDNNSENHRKEVDHSEVEREAAVNEKEENKSGIVLEDQKSENNNEDKPQVEHEQKQNNSENHQEEVDHSEVEREAAANDKEENESGIVIEDKKSENNNEERGGEEKEAVEGEVSEEVKEAKAEVAQPKQQLAAKGKHESQVSNDMIEETATKLLGRKNKVLALAGAFQTVIDHQGK* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3295 493 MobiDBLite consensus disorder prediction 212 460 - -
Tpr1g3295 493 MobiDBLite consensus disorder prediction 91 132 - -
Tpr1g3295 493 MobiDBLite consensus disorder prediction 212 440 - -
Tpr1g3295 493 MobiDBLite consensus disorder prediction 150 192 - -
Tpr1g3295 493 Coils Coil 369 396 - -
Tpr1g3295 493 MobiDBLite consensus disorder prediction 1 192 - -
Tpr1g3295 493 Pfam Plant calmodulin-binding domain 379 488 IPR012417 GO:0005516
Tpr1g3295 493 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 491 - -
Tpr1g3295 493 PANTHER EMB|CAB62594.1 1 491 - -
Tpr1g3295 493 MobiDBLite consensus disorder prediction 1 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3295 - - mtr:MTR_1g009660 406.371