Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3273 ATGGAGCACACAAACAGTGATGGCACAAATGAGAAATTGTTGATGGAAAATGGCATTTCTTCATCATCATCTTCTTCTCAACCCAGAAAGGGTGGTTTCAGAACCATGCCCTTTATCATAGTGAATGAATGTCTTGAGAAAGTGGCAAGTTATGGAATAATGCCTAACATGATATTGTACTTGATAAATGATTATAACATGGCTGTTGCTAAGGCTACTAATGTTCTTTATACTTGGTCTGCTATGTCCAATATCTTGTCCATTTTTGGTGCATTTTTCTCTGATTCTTACTTGGGTCGCTTCAATGTCATCTTCATTGGTTCCTTCTCTAGCCTTCTTGGTTTAACCATTTTGTGGTTAACTGCCATGCTCCCGGTGCTAAAACCTTCTTGCGCATCACTCATCGAAATCTGCAACTCTGCTACATCATCTCAACAAGCAGTTTTGTTCTTTTCGTTAGGATTAATTTCCATTGGAGCTGGTTGTGTTAGACCTTGTTCCATAGCTTTTGGAGCAGATCAATTGGCTATTAAGGAAAATTCAGATAATGGTAGGATCTTGGATAGCTACTTTAATTGGTATTATACATCAATTGGAGCTTCAACCATTATTGCGTTGAGCGTGATTGCTTACATTCAAGAAAACCTAGGATGGAAAATCGGGTTTGGAGTACCTGCGGTGCTAATGCTGATTTCGGCTTTCAGTTTCGTTATTGGTTCACCGTTCTATGTTAAAGTGAAGCCAAGTGAGAGCTTATTCACTAATTTTGTAAGAGTAGTTGTTGTGGCCACAAAGAACAGAAAACTTAGTCTTCCTGATCACAACTTTAATCTGTACTGTCGAGGCGATGATTCAGACCTGACGGTCCCTACTGATAGTCTTAGGTTTTTGAACAAAGCTTGCGTAATAAGAAATCACGAGACAGACCTAAACCCAGATGGATCAATTTCGAATCCGTGGAACCTATGCACAATAGGACAGGTGGAGTCGCTGAAATCTTTGCTCAGAGTCCTTCCTATTTGGTCTACGGGAATCTTTATGATGGCAACTCAGAGTTCATTTTCCACTCTTCAAGCCAAAACAATGAACAGAAGGTTATTCGGCAACTTCAATTTTCCTGCAGGATCGTTCAATCTTATCATGATACTCACCTTATCAATAGTCATTCCTTCATATGACCGCATCGCAGTACCTCTACTAGCCAAATACACAGGTCGTCCTAGAGGATTCAGTTGTAAAGTCCGCATTGGGATAGGAATGCTGTTTGTAATTTTAGCTAAAGCAATAGCAGCTATTGTTGAAACCGTGAGACGAAATGCAGTGATTGAACAAGGCTTTGAGGACGAACCTAACGCTGTAATCAACATGTCAGCTTTATGGCTTGTTCCAGAGTTTGTTTTGCTTGGATTCGGCGAGGCTTTCACACCAGTTGGGCTAGTTGAGTATTTCTACACTTATTTCCCTAAGAGTATGTCTAGTTTTGCAATGGCGATGTTCACGCTGGAACTAGCTGCTTCTGATGTAGTTGGAAGTGTGATTGTGAACATTGTCGACAAAGTCACTAGTATTGGAGGGAAAGAGAGCTGGTTAACAACTAACATCAACAAGGGCCATCTGAATTACTATTATGCGCTACTCGCTATCTTAGGTATGATTAACTACCTCTATTATCTTGTTATTTGTTGGGCTTCTGGACCCGAACACGGAGAAAAACTTGAAGCTTCGTCAGAAAAGGAAGATGATAAATTTGATTACAAGGAGTTACCTACATCATAG 1776 0.402 MEHTNSDGTNEKLLMENGISSSSSSSQPRKGGFRTMPFIIVNECLEKVASYGIMPNMILYLINDYNMAVAKATNVLYTWSAMSNILSIFGAFFSDSYLGRFNVIFIGSFSSLLGLTILWLTAMLPVLKPSCASLIEICNSATSSQQAVLFFSLGLISIGAGCVRPCSIAFGADQLAIKENSDNGRILDSYFNWYYTSIGASTIIALSVIAYIQENLGWKIGFGVPAVLMLISAFSFVIGSPFYVKVKPSESLFTNFVRVVVVATKNRKLSLPDHNFNLYCRGDDSDLTVPTDSLRFLNKACVIRNHETDLNPDGSISNPWNLCTIGQVESLKSLLRVLPIWSTGIFMMATQSSFSTLQAKTMNRRLFGNFNFPAGSFNLIMILTLSIVIPSYDRIAVPLLAKYTGRPRGFSCKVRIGIGMLFVILAKAIAAIVETVRRNAVIEQGFEDEPNAVINMSALWLVPEFVLLGFGEAFTPVGLVEYFYTYFPKSMSSFAMAMFTLELAASDVVGSVIVNIVDKVTSIGGKESWLTTNINKGHLNYYYALLAILGMINYLYYLVICWASGPEHGEKLEASSEKEDDKFDYKELPTS* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3273 591 Pfam POT family 101 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr1g3273 591 MobiDBLite consensus disorder prediction 572 591 - -
Tpr1g3273 591 CDD MFS_NPF1_2 36 562 - -
Tpr1g3273 591 Gene3D MFS general substrate transporter like domains 8 568 IPR036259 -
Tpr1g3273 591 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 24 569 - -
Tpr1g3273 591 SUPERFAMILY MFS general substrate transporter 27 561 IPR036259 -
Tpr1g3273 591 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 24 569 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3273 Tpr-Chr1 37190069 37193380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3273 22 566 Organic Solute Cotransporters AT1G52190 52.973 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3273 K14638 - gmx:100819779 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3273 1 37190069 37193380 Tpr1g3273 1 37190069 37193380 ECH