Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3255 ATGGCGTTTCATCTCTTTCACATCATTACCTTTCTCATGCTTGTGGTAGTGGGAACAAATGGTGCAATATTACCACCTCAACTTTATTGGAAGTCAGTCGTCCTTCCCAACACTCCAATGCCAAAAGCCATCACTAATCTCCTACACCCTGTTGGATATTGGAGTGAAGGGAAAGCAACAGCAACTTGGGTGGATGCAAGCAAGTATGGTATAAATGTCCATGCTGTGCCTGAAGATAGTCCATTTAGTTACAAGTATGCTGCAACTGATACTCAATTGCATTATAACTCAAATGTAGCACTCTTCTTCTTGGAAAAGGATTTGTATTATGGTAAAAAATTCAACATGAAATTCACAAAAACAAATAATAATGGAGCAAAGTTCTTGCCTAAAGAGGTTGCTGATTCAATACCTTTTTCATCAAACAAAATGGAAAACATCCTTCATAAATTCTCCATCAAGAAAGGATCAAAGGAATCTGAAATTGTGAAAAACACAATCAATGAATGTGAAGAAAAGGGTATTAAAGGAGAGGAAAAGCTTTGTGTAACATCATTGGAATCAATGGTTGATTTTGCTACTTCGAAACTTGGGAGTAACAATGTTGAAGCTATTTCAACAGAAGTGGAAAAAGAAAGTAATGAGTTGCAAGAATATGTAATAGCAAAAGGAGTTAAGAAATTGGGAGACAATAACAAAAACAAACAACCTGTTGTGTGTCACATAGAAAATTATCCTTATGCAGTTTTTTACTGTCATAAAACAGATACAACTAAAGTTTATTATGTGCCTTTGGAAGGTGTTGTTGATGGAAACAGAGTTAAAGCTATTGTTGTTTGTCACACTGATACTTCAGAATGGAATCCTAAACATTTGGCTTTTCAAGTGCTTAAAGTTGAACCTGGAACTGTTCCAATTTGTCACTTCCTCCCACAGGATCATGTTGTTTGGTTTTCTAAGTGA 963 0.3572 MAFHLFHIITFLMLVVVGTNGAILPPQLYWKSVVLPNTPMPKAITNLLHPVGYWSEGKATATWVDASKYGINVHAVPEDSPFSYKYAATDTQLHYNSNVALFFLEKDLYYGKKFNMKFTKTNNNGAKFLPKEVADSIPFSSNKMENILHKFSIKKGSKESEIVKNTINECEEKGIKGEEKLCVTSLESMVDFATSKLGSNNVEAISTEVEKESNELQEYVIAKGVKKLGDNNKNKQPVVCHIENYPYAVFYCHKTDTTKVYYVPLEGVVDGNRVKAIVVCHTDTSEWNPKHLAFQVLKVEPGTVPICHFLPQDHVVWFSK* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3255 320 SMART BURP_2 100 320 IPR004873 -
Tpr1g3255 320 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 17 318 IPR044816 -
Tpr1g3255 320 Pfam BURP domain 101 318 IPR004873 -
Tpr1g3255 320 ProSiteProfiles BURP domain profile. 102 320 IPR004873 -
Tpr1g3255 320 PANTHER BURP DOMAIN PROTEIN RD22 17 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3255 Tpr-Chr1 36975675 36977520 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3255 - - gmx:100272209 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3255 1 36975675 36977520 Tpr1g3255 1 36975675 36977520 ECH