Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3253 ATGGAGTTTCATCTCTTTCACATCATTACTTTTCTCATGTTTGTGGTAGTGGGAACAAATGCTACAATATTACCACCACAACTTTATTGGAAGTCCATCCTTCCCAACACTCCAATGCCAAAAGCCATCACTAATTTCCTACACTCTGCTGGATATTGGAGTGGTTGGGTGGATCCAAGCAAGTGTATTAATTTACTTAATTACAAGCATGCTGCAAGTGAGACTCAATTACATGATAAGTCAAATGTAGCAATCTTCTTCTTGGAAAATGCTTTGCATTATGGTAAAAAATTGAACATGCAATTCACAAAAACAACTTCAAATAATAATGGATCAAAATTCTTGCCTAAAGAGGTTGCTGATTCAATACCTTTTTCATCAAACAAAATGGAAAACATCCTTCATAAATTCTCCATCAAGAAAGGATCAAAGGAATCTGAAATTGTGAAAAACACAATCAATGAATGTGAAGAAAAGGGTATTAAAGGAGAGGAAAAGCTTTGTGTTACATCATTAGAATCAATGGTTGATTTTGCTACTTCGAAACTCGGAAATAATGTTGAAGCTATTTCAACAGAAGTGGAAAAAGAAAGTAGTGAGTTGCAAAAATATGTAATAGCAAAAGGAGTTAAGAAATTGGGAGACAATAACAAAGTTGTAGTGTGTCACAAAGAGAATTATCCTTATGCAGTTTTTTACTGTCATAAAATGGATACAACTAAATTTTACTCTGTGCCTTTGGAAGGTGTTGATGGAAACAGAGTTAAAGCTGTTGCTGTTTGTCACACTGATACTTCAAAATGGAATCCTAAACATATTGCTCTTCAAGTGCTTAAAGTTGAACCTGGAACTGTTCCAGTTTGTCACTTCCTCTCACAGGATGATGTTGTTTGGTTTTCCAAGTGA 906 0.3466 MEFHLFHIITFLMFVVVGTNATILPPQLYWKSILPNTPMPKAITNFLHSAGYWSGWVDPSKCINLLNYKHAASETQLHDKSNVAIFFLENALHYGKKLNMQFTKTTSNNNGSKFLPKEVADSIPFSSNKMENILHKFSIKKGSKESEIVKNTINECEEKGIKGEEKLCVTSLESMVDFATSKLGNNVEAISTEVEKESSELQKYVIAKGVKKLGDNNKVVVCHKENYPYAVFYCHKMDTTKFYSVPLEGVDGNRVKAVAVCHTDTSKWNPKHIALQVLKVEPGTVPVCHFLSQDDVVWFSK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3253 301 SMART BURP_2 84 301 IPR004873 -
Tpr1g3253 301 Pfam BURP domain 85 299 IPR004873 -
Tpr1g3253 301 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 17 299 IPR044816 -
Tpr1g3253 301 PANTHER BURP DOMAIN PROTEIN RD22 17 299 - -
Tpr1g3253 301 ProSiteProfiles BURP domain profile. 86 301 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3253 Tpr-Chr1 36965960 36967651 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3253 - - gmx:100272209 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3253 1 36965960 36967651 Tpr1g3253 1 36965960 36967651 ECH