Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3249 ATGGAGTTTTATGTCTTTCACATCATTACTTTTCTCATGCTTGTGGTAACTAATGCTGCAACGTTACCTCCTCAACTTTATTGGAAATCAATGCTTCCCAACACTACAATGCCAAAAGCCATCACTAATCTCTTACGGCCAGTTGCTGAATATTGGAGTGAAGGAAAAGCGACTTGGATCAATGATGCTGACGGTGTTGAATTTAATGTTTACTATGTTTATCCTGAAAAAGTTGAGCATAATATATCAAATTTAGGTAACTTCTTCTTGAAAAAGGATTTGCATGATGGTAAAAAATTGAGCATGATATTCCCCAAAACAACCTCAAACAATAATGTAGCAAAATTCTTGCCTAAAGAGGTTGCTGATTCAATACCATTTTCATCAAACAAAATGGAAAACATCCTTCATAAATTATCCATCAAGAAAGGAACAAAGGAATATAAAATTGTGAAAAAAACAATCAATGAGTGTGAATCAAAGGGTATTAAAGGAGAGGAAAAACTTTGTGTAACATCATTAGAGTCAATGGTTGATTTCACTACTTCAAAACTTGGAAAAAATGTTGAAGCTATTTCAACTGAAGTGAAAAAAGAAAGTAACGAGTTCCAAGAATATGTGATAGAAAAAGGAGTGAAGAAATTGGGAGATAAGAACAAAACTATTGTGTGTCACAAAGAGAATTACCCTTATGCAGTTTTTTACTGTCATAAAACATATACAACTGAAGTTTACTCTGTGTCTTTGGAAGGTGTTGATGGAAACAGAGTTAAAACTGTTGCTGTTTGTCACACTGATACTTCACAATGGAATCCTAAACATTTGGCTTTTCAAGTGCTTAAAGTTGAACCTGGAACTGTTCCAATTTGTCACCTTCCCCCACAAAATCATGTTGTTTGGGTTTCCAAGTAA 912 0.3399 MEFYVFHIITFLMLVVTNAATLPPQLYWKSMLPNTTMPKAITNLLRPVAEYWSEGKATWINDADGVEFNVYYVYPEKVEHNISNLGNFFLKKDLHDGKKLSMIFPKTTSNNNVAKFLPKEVADSIPFSSNKMENILHKLSIKKGTKEYKIVKKTINECESKGIKGEEKLCVTSLESMVDFTTSKLGKNVEAISTEVKKESNEFQEYVIEKGVKKLGDKNKTIVCHKENYPYAVFYCHKTYTTEVYSVSLEGVDGNRVKTVAVCHTDTSQWNPKHLAFQVLKVEPGTVPICHLPPQNHVVWVSK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3249 303 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 14 301 IPR044816 -
Tpr1g3249 303 Pfam BURP domain 88 301 IPR004873 -
Tpr1g3249 303 SMART BURP_2 86 303 IPR004873 -
Tpr1g3249 303 ProSiteProfiles BURP domain profile. 88 303 IPR004873 -
Tpr1g3249 303 PANTHER BURP DOMAIN PROTEIN RD22 14 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3249 Tpr-Chr1 36939298 36943198 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3249 - - mtr:MTR_1g008530 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3249 1 36939298 36943198 Tpr1g3249 1 36939298 36943198 ECH