Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3248 ATGGAGTTTCCTCATTTATCCATCTTTATTGTGCTCAATCTTGCACTTGTAGCAACACATGCTGCCTTACCTCCTGAATTATACTGGAAGTCCAAACTTCCCACAACTCAAATGCCAAAAGCCATCACTGATCTCCTTCAAGCTGATTGGACAGAAGAGAAAAGCACATCAGTAGCTGTAGGAAAAGGCGGCGTCAATGTTGATACAGGAAAAACAAAACCAGGAGGAACATCGGTTAATGTAGGAAAAGGTGGAGTCCATGTTGATGCAGGGAAAACAAAGCCAGGTGGAACATCAGTCAATGTAGGTAAAGGTGGAGTTCATGTAAATGCAGGAAAAGGAAAACCGTCCGGTGGAACATCGGTTAATGTTGGTCATGGAGGCGTCAATGTTCACGCTCCCGGAAAAGGAAGAGGAAAACCAGTTCATGTTTTCGTTGGAAAAAAATCACCATTTGATTACAATTATGCTGCTAGTGAGACACAATTAAATGATAAACCAAATGTAGCACTTTTCTTCTTAGAAAAAGATTTGCATCAAGGAACAAAATTGAACTTGCAATTCGCGCAAAACTCAAACGATAATGATGCAAAATTCTTGTCTAAAGAAGTTGCTAATTCGATACCTTTTTCATCAAGCAATGTTGAAACCATACTCAACAAGTTTTCAATCAAGGAAGGAACAAATGAAGCTGAAAATGTGAAGAATACAATAAGCGAGTGCGAAGAAAAAGGTATCAAAGGAGAAGAAAAGCTTTGTGTAACCTCATTAGAATCAATGGTTGATTTCACTACTTCGAAACTGGGAAACAATGTTGAAGCTATTTCAACAGAAGTGAAAAAAGAAAGTAATATGCAACAATATGTAATAGCAAAAGGAGTGAAGAGATTGGGAGATAAGAACAAAGCTGTTGTTTGTCACAAAGAGAATTACCCTTACGCGGTTTTTTACTGTCATAAAACGGATACAACTAAAGTTTACTCTGTGCCTTTGGAAGGTGTTGATGGAAACAGAGTTAAAGCTGTTGCGGTTTGTCACACTGATACATCACAATGGAATCCTAAACATTTGGCTTTTCAAGTGCTTAAAGTTGAACCTGGAACTGTTCCAGTTTGTCACTTCCTCCCACAAGATCATGTTGTTTGGGTTTCTAAGTGA 1158 0.3843 MEFPHLSIFIVLNLALVATHAALPPELYWKSKLPTTQMPKAITDLLQADWTEEKSTSVAVGKGGVNVDTGKTKPGGTSVNVGKGGVHVDAGKTKPGGTSVNVGKGGVHVNAGKGKPSGGTSVNVGHGGVNVHAPGKGRGKPVHVFVGKKSPFDYNYAASETQLNDKPNVALFFLEKDLHQGTKLNLQFAQNSNDNDAKFLSKEVANSIPFSSSNVETILNKFSIKEGTNEAENVKNTISECEEKGIKGEEKLCVTSLESMVDFTTSKLGNNVEAISTEVKKESNMQQYVIAKGVKRLGDKNKAVVCHKENYPYAVFYCHKTDTTKVYSVPLEGVDGNRVKAVAVCHTDTSQWNPKHLAFQVLKVEPGTVPVCHFLPQDHVVWVSK* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3248 385 Pfam BURP domain 171 383 IPR004873 -
Tpr1g3248 385 SMART BURP_2 170 385 IPR004873 -
Tpr1g3248 385 Coils Coil 224 244 - -
Tpr1g3248 385 ProSiteProfiles BURP domain profile. 172 385 IPR004873 -
Tpr1g3248 385 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 9 383 - -
Tpr1g3248 385 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 9 383 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3248 Tpr-Chr1 36923338 36926506 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3248 - - gmx:100170724 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3248 1 36923338 36926506 Tpr1g3248 1 36923338 36926506 ECH