Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3235 ATGGCGATTATCTCCGATTATCAAGACGATGAACAAACCAAGAAACAAACTCCTCCATCATCATCATCATCATCATCATCATATTCTCAATCAAAACCCTCCAAATCCATTCCATTCACTTCCACCTTCGATCCATCAAATCCAACCGCTTTTCTTGATAAGGTTTTCGATTTCATCGCTAAGGAAAGCGATTTCTTCGAAAAGGATTCCGCTGAGAAAGTGATTTTGTCTGCCGGTAGCGCTGCAAAGGTGAAGAAAGCTAAGGTCGTTGCTGCTGAGAAAGCTAAGATTGCTGCTGAGGAGAAGGCGAAGGCTGAGAAGGTTGCGGCCGTCGCGAAGAAAGATAAGGAAGATGAGAAGAAGGATCAAGAAAGTTCATTAGCCGCTCCAAATAAGGGTAATGGTATGGATCTGGAGAAGTATTCTTGGACTCAAACTCTCCAAGAGCTCAATGTGAATGTTCCAGTGCCACATGGAACAAAATCAAGATTTCTCACCTGTGAGATAAAGAAGAACCATCTGACAGTCGGACTCAAAGGCCAGCCACCGATTATTGATGGGGAGCTATACAAATCTATCAAGCCTGATGAATGTTATTGGAGCATAGAGGATCAGAGTGTGGTTTCTATTCTTTTAACCAAGCATGATCAAATGGATTGGTGGAAATGTTTGGTAAAGGGTGATCCTGAAATTAACACCCAGAAAGTTGAACCTCAGACCAGCAACCTTGGTGACCTCGATCCTGAGACTCGACAAACTGTTGAAAAAATGATGTTTGATCAGAGGCAGAAGTCTAGGGGCCTTCCTACAAGTGAGGAGATTCAAAAACAGGAAATGATGAAGAAATTTATGAGCCAGCATCCTGAGATGGACTTCTCCGGGGCAAAATTATCTTAG 897 0.4281 MAIISDYQDDEQTKKQTPPSSSSSSSSYSQSKPSKSIPFTSTFDPSNPTAFLDKVFDFIAKESDFFEKDSAEKVILSAGSAAKVKKAKVVAAEKAKIAAEEKAKAEKVAAVAKKDKEDEKKDQESSLAAPNKGNGMDLEKYSWTQTLQELNVNVPVPHGTKSRFLTCEIKKNHLTVGLKGQPPIIDGELYKSIKPDECYWSIEDQSVVSILLTKHDQMDWWKCLVKGDPEINTQKVEPQTSNLGDLDPETRQTVEKMMFDQRQKSRGLPTSEEIQKQEMMKKFMSQHPEMDFSGAKLS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3235 298 Coils Coil 102 122 - -
Tpr1g3235 298 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 29 296 IPR037898 -
Tpr1g3235 298 MobiDBLite consensus disorder prediction 112 126 - -
Tpr1g3235 298 ProSiteProfiles CS domain profile. 136 225 IPR007052 -
Tpr1g3235 298 MobiDBLite consensus disorder prediction 112 131 - -
Tpr1g3235 298 MobiDBLite consensus disorder prediction 1 43 - -
Tpr1g3235 298 SUPERFAMILY HSP20-like chaperones 124 238 IPR008978 -
Tpr1g3235 298 MobiDBLite consensus disorder prediction 14 43 - -
Tpr1g3235 298 CDD p23_NUDC_like 141 225 - -
Tpr1g3235 298 Gene3D - 132 259 IPR008978 -
Tpr1g3235 298 PANTHER PROTEIN BOBBER 2 29 296 - -
Tpr1g3235 298 Pfam CS domain 140 214 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3235 Tpr-Chr1 36792556 36794841 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3235 K25866 - gmx:100813799 358.992