Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3206 ATGCCACACTCTTCTAAGGTCAGGCTGGTTGGCATGTTTGAAGCTGTGCAGGAGATTGCAATCTACATTCATAGGTTTCACAATCTGGACCTTTTCAGTCAGGGATGGTATCAGATTAAAGTTACTATGAGATGGGAGGACAGTGAAAATATATTTTTTGGAATTCCAGCTAGAGTTGTTCAATATGAAGATCCTGATCTAGGTCCTGGCAGTTTACATGGTATTTGGAGAATCGATGATACAGACAACAGTTTCTCAACACAGCCTTTTCGGATAAAATATGCCAGGCAGGATGTTCATTTATGTATGATGGTCTCGTTTAATTTATCTCTTAGTAGATATCAGGGTTTACCTACTACTGCTGTTATTTTGAAGTTCGAGCTTATGTATGCTCCCCCGGTTGAAAATGGTACTGAATTGCAAGATGCTCTGGATCCTTACCCTGCTTCTGTCCATGAATTCCGAATTCCTCCTAAAGCTCTTTTAGGACTGCATTCATATTGTCCTGTACATTTTGATGCTTTACATGCTGCTCTTGTTGATGTCAGTGTACATGTCAGTTTACTGAGAGCTCCCCCTTATCCATCTGCATTGAAGGTACCCAGCAATTCTCACAATTCTGAAGTCGTCGTAGATAAAAGTTATGACACATTGAACCACGGCTTGGAAGAAGTTGCCTCTGTAGATTTGGAAAATGTAATGCTTCTTAAGACATTATTAATGGCTCGTGATATATTACTTGAAGAATTACAAAAACTTAGCAAAGCAGTTAATCAGACTATTGAGATTTCAGAGTTTCAGTCAAAGTTGAACAATGATAAAATATTAAAATTTGTTGTGCAAGCAAATCGGTTTGCAACAGATGTTGAAATTTTAGCACAAGGAAATCCACAAAATGGTCTAAAGAGAGGAAATGATGCTCTGGATCTTCTGATTGCTGAAAAGCTTCGATCCTTGTCAAAGAGTGAGCTGTTGGACTGTTGCCATTCAGTGGGAGACCAATTGTTGTATTTGTGGAACACATTTCTAAAATTCCACAGAGATAACAAAACAAAGATTCTAGAATTTTTGCGTGATGCTTGGGCTATGGATAGGAAAACAGAATGGTCAATATGGATGGTATATTCTAAGGTAGAGATGCCTCATCATTATATAAACAGTTGGAATGATGAGTTTTCCTATCGTGGGGTGCACAGAAGAGTTTCCAGTTTGTTGAAGTCATCTGATGAGCCTCTTCAGACTGCAGCTACGCGTGCTGAAGTTCATCGAAAGAGCATTGCACAAATGAGGATTAACAACCAATCAATTCAAGACATGCAAATGTTTGGAGATCCTTTGCGTATACCAATTGTGATTGTTGAACGTGTGATGAATGCACCACGGCGCACGATCAGTGAAAATTCATACCTGAGAAATGTCATACTTCCAAATTCACATAATTTTCAAGATGGGCTCAACTCAGTCTCAGACACTGCAAACAAAGAATCTAACCCACAAAGCAATGCTCGTGTGTTGAAGATTGTTGTCTTTGTACATGGGTTTCAGGGGCATCATCTGGATCTACGACTTATTCGAAATCAATGGCTTTTGATAGATCCGAAGGTAGAAGTTCTGATGTCACAGGCTAATGAAGATAAAACATCAGGCGACTTCAGAGAAATGGGACAAAGGCTATCGCAGGAAGTGATTTCCTTTGTTAAAAAGAAAATGGATAAAGCATCAAAATATGGAAATTTGGGAGATATTAGACTCAGTTTCGTTGGACATTCTATTGGGAACCTCATTATAAGAACAGCAATAGCTGAGAGCACGATGGAGCCATTTCTAAGATACTTACATACATATGTCTCGTTGTCTGGTCCGCACTTGGGGTATCTTTATAGTTCAAACTCACTCTTTAATTCTGGGCTATGGCTTTTCAAGAAACTAAAAGGCACACAATGCATTCATCAACTCACCTTCACAGATGATCCAGATATTCAAAATACATTTCTCTATAAACTTTGTAAGCAGAAGACCTTGGATAATTTTAGGCATATAATTTTGCTATCTTCCCCTCAGGATGGTTATGTGCCATACCATTCTGCTAGAATAGAATCATGCCAGGCTGCTTCACGTGACAATTCAAAGAAGAGTAGAGTGTTCCTAGAGATGTTGAATGATTGTTTGGACCAAATTCGTGCCAATCCCTCTGAACGTAGAGTATTTATGCGTTGTGATGTCAATTTTGATGCCACTGCCTATGGCAAGAATTTAGACTCTCTAATTGGCCGGGCTGCTCATATCGAGTTTCTGGAGTCTGACATTTTCGCAAGGTTCATAATGTGGTCATTTCCAGAACTATTTCGATAG 2352 0.3912 MPHSSKVRLVGMFEAVQEIAIYIHRFHNLDLFSQGWYQIKVTMRWEDSENIFFGIPARVVQYEDPDLGPGSLHGIWRIDDTDNSFSTQPFRIKYARQDVHLCMMVSFNLSLSRYQGLPTTAVILKFELMYAPPVENGTELQDALDPYPASVHEFRIPPKALLGLHSYCPVHFDALHAALVDVSVHVSLLRAPPYPSALKVPSNSHNSEVVVDKSYDTLNHGLEEVASVDLENVMLLKTLLMARDILLEELQKLSKAVNQTIEISEFQSKLNNDKILKFVVQANRFATDVEILAQGNPQNGLKRGNDALDLLIAEKLRSLSKSELLDCCHSVGDQLLYLWNTFLKFHRDNKTKILEFLRDAWAMDRKTEWSIWMVYSKVEMPHHYINSWNDEFSYRGVHRRVSSLLKSSDEPLQTAATRAEVHRKSIAQMRINNQSIQDMQMFGDPLRIPIVIVERVMNAPRRTISENSYLRNVILPNSHNFQDGLNSVSDTANKESNPQSNARVLKIVVFVHGFQGHHLDLRLIRNQWLLIDPKVEVLMSQANEDKTSGDFREMGQRLSQEVISFVKKKMDKASKYGNLGDIRLSFVGHSIGNLIIRTAIAESTMEPFLRYLHTYVSLSGPHLGYLYSSNSLFNSGLWLFKKLKGTQCIHQLTFTDDPDIQNTFLYKLCKQKTLDNFRHIILLSSPQDGYVPYHSARIESCQAASRDNSKKSRVFLEMLNDCLDQIRANPSERRVFMRCDVNFDATAYGKNLDSLIGRAAHIEFLESDIFARFIMWSFPELFR* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3206 783 Coils Coil 236 256 - -
Tpr1g3206 783 PANTHER UNCHARACTERIZED 7 783 IPR044294 -
Tpr1g3206 783 SUPERFAMILY alpha/beta-Hydrolases 507 699 IPR029058 -
Tpr1g3206 783 PANTHER ESTERASE FAMILY PROTEIN, PUTATIVE-RELATED 7 783 - -
Tpr1g3206 783 Pfam Putative serine esterase (DUF676) 505 702 IPR007751 -
Tpr1g3206 783 Gene3D alpha/beta hydrolase 506 720 IPR029058 -
Tpr1g3206 783 Pfam Protein FAM135 124 188 IPR022122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3206 Tpr-Chr1 36491998 36502699 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3206 - - mtr:MTR_1g007420 1324.3