Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3198 ATGGAGGTGGATGAAAAGCAAAATGAAAGAAACAAAGAAGTTGATCAAATACCAAATGACAGTGAACTAGATGATGATGGCAAACCAAAACGAACAGGGACAACATGGACCTCAGTCGCGCATATCATAACGGCGGTGATTGGTGCTGGTGTGCTAACATTGCCATGGGTGATGGCTCAAATGGGATGGATCCTTGGTGTTTCATATATATTAACCATAGCTCTTGTTACACTCTACACTTCAAATCTTCTAGCAGATTGTTATAGATCACCAGACCCTGTCACTGGTGAGAGGAATCACACTTACATGGAGGCTGTCAAAAATATCTTAGGTGGTAGAATGTATATGATTTGTGGAATAGTCCAATATGCTAACCTTAGTGGAGCAGCAATTGGATACACAATAACTACTTCTATGAGCGCTGTGTCAATACGAAAAATTAACTGCTTCCACAAACGGGGAACTGAATATCCATGCCATTTTTCTAATAATCCATACATGATTGGTTTGGGTATTGTTGAAATCTTTTTGTCCCAAATCCCAAATTTTCACAAGTTATCTTGGCTCTCAATTGTAGCAGCAACAACTTCTTTTGGTTATGCCTTTATTGGTATTGGACTTTCTCTTGCTACTATTATCCAAGGAAAAGGAAAGAGTACACATTTAATCGGAGGCAAGGAGCAATTTTCAGGAGACAGATTGTGGAATATGCTCATTGCATTGGGAAATTGTGCACTTGCTAGCAACTATTCTCTAATAGCAATAGATATTCAGGATTCATTAAAGTCAACACCACCAGAAAATAAAGTGATGAAGATGTCAAACAAAATAGGAATACTTATAATGACAATTATCTTCCTCTTATGTGCTTGCTCTGGCTATGCTGCATTTGGATCAAACACTCCAGGAAGCATTCTAATGGGCTCTGGCTTTAAAGAGCCATTTTGGCTTGTTGATTTAGCCAATGTCTTCATTATTGTGCATTTGGTTGGAGCATATCAGGTAATTGTCCAACCAATTTTCAGAGTGGTTGAAATATTTGCTGGTAAAATGTGGTCAAAATCAAGTTTTATAAGTAGAGAGTACTCAATTGGCATTGGCAAAATGAAATCCAACTTCAATTTTTTTAGGCTCATTTGGAGGACCATATTTGTGACACTAATTACTGTTTTGGCTATGGCAATGCCCTTTTTTAATGATATGCTTGGACTTCTTGGAGCAATGGGATATTGGCCATTAACAATATACTTTCCAATTGCAATGTATATTGCCAAAGAAAAAATGAGGAGACTTACAATCAAATGGTTTGGACTTCAAACATTGAACTTTATTTTTATGGTGGTGTCATTAATTGCAGCTATTGCAGCCATTCATGGGTTGCATGAAGCATTACATAAATACAAACCCTTTATGTATAAAATGTAG 1425 0.3705 MEVDEKQNERNKEVDQIPNDSELDDDGKPKRTGTTWTSVAHIITAVIGAGVLTLPWVMAQMGWILGVSYILTIALVTLYTSNLLADCYRSPDPVTGERNHTYMEAVKNILGGRMYMICGIVQYANLSGAAIGYTITTSMSAVSIRKINCFHKRGTEYPCHFSNNPYMIGLGIVEIFLSQIPNFHKLSWLSIVAATTSFGYAFIGIGLSLATIIQGKGKSTHLIGGKEQFSGDRLWNMLIALGNCALASNYSLIAIDIQDSLKSTPPENKVMKMSNKIGILIMTIIFLLCACSGYAAFGSNTPGSILMGSGFKEPFWLVDLANVFIIVHLVGAYQVIVQPIFRVVEIFAGKMWSKSSFISREYSIGIGKMKSNFNFFRLIWRTIFVTLITVLAMAMPFFNDMLGLLGAMGYWPLTIYFPIAMYIAKEKMRRLTIKWFGLQTLNFIFMVVSLIAAIAAIHGLHEALHKYKPFMYKM* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3198 474 MobiDBLite consensus disorder prediction 1 30 - -
Tpr1g3198 474 Pfam Transmembrane amino acid transporter protein 31 459 IPR013057 -
Tpr1g3198 474 PANTHER ACID TRANSPORTER, PUTATIVE-RELATED 20 467 - -
Tpr1g3198 474 PANTHER OS05G0424000 PROTEIN-RELATED 20 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3198 Tpr-Chr1 36430690 36434840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3198 22 470 Organic Solute Cotransporters AT1G10010 50.993 9.79e-176 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3198 K24917 - gmx:100804643 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3198 1 36430690 36434840 Tpr1g3198 1 36430690 36434840 ECH