Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3176 ATGATGGCGTGTCTCCGGTTGATTCCACCACAATCACAAAATCTAAATTCCATTCATTTCATTCATCATCATCACCGCTTTTCATATCAACAACATCGCCTCAGTTATCCCGTCACTAAAACCAATGCTCTCACTAATTCTGATTTACTTGATTCTGATCAAACTCGAGTATTTGTTGATGCTGTTCCTCTTTTATCTTGCTCTCAGGCCTATGAAAGGCTGAAAACATTCAGAGAAAAGATAAATGGAAAGCAGCAATACCTTGCCATGTATTCTAGTATTTTTGGTGGGATAACAACTGATCCAGCAGCTATGGTTATTCCTATGGATGACCACATGGTGCATAGGGGCCATGGTGTCTTTGATACTGCAGCAATAATGGACGGGTACTTATACGAGCTAGATCAACACCTAGATCGCTTTTTAAATTCGGCCTCAAGGTCTAAAATAGATCCTCCATTTGATCGAGAAATTATACGAAGAATTCTCATACAAACTGTGAGTGCTTCCAAATGTAGAAAAGGATCACTAAGATACTGGCTATCAGCAGGACCTGGTGATTTTCAGCTCTCTCCCTCTGGCTGTCACCAGTCAGGGCTTTATGCAATTGTAATACAGGACCTGTCACCGGCAGCGGCTTCAGATAAGTCCAAGGGAGTTAAAGTCATTACATCATCTATTCCGATAAAACATCCCATGTTTGCAATCACCAAGAGTGTGAATTACCTTCCAAATGTGCTCTCAAAGATGGAGGCGGATGAAGCTGGTGCTTTTGCAGGCATTTGGCTTGACGATGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCTTTTGTCACCAAAGAGAAGGAACTTATAATGCCTCACTTCGACAAAATTCTAAGTGGATGTACAGCTAAGAGAGTTTTAGCCCTTGCTGAGAGTTTGTTGAAGCAGGGTGAGCTTCAGGGGATAAGGATGAAAAATGTAACCGTCGAAGAAGGGAAGAAAGCAGATGAAATGATGCTTATTGGCAGTGGAGTTTTGGTTTGCCCTGTAGTGCAGTGGGATGACCAGGTTATTGGAGATGGCAAAGAAGGCCATATAACACAAGCTCTCTTAAATCTAATTGTCGATGACATGAAATCAAGTCCACCTACCGTTCGCACACCTGTTCCGTATTGA 1167 0.4216 MMACLRLIPPQSQNLNSIHFIHHHHRFSYQQHRLSYPVTKTNALTNSDLLDSDQTRVFVDAVPLLSCSQAYERLKTFREKINGKQQYLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLNSASRSKIDPPFDREIIRRILIQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCHQSGLYAIVIQDLSPAAASDKSKGVKVITSSIPIKHPMFAITKSVNYLPNVLSKMEADEAGAFAGIWLDDEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLALAESLLKQGELQGIRMKNVTVEEGKKADEMMLIGSGVLVCPVVQWDDQVIGDGKEGHITQALLNLIVDDMKSSPPTVRTPVPY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3176 388 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 95 377 IPR036038 GO:0003824
Tpr1g3176 388 CDD PLPDE_IV 111 371 - -
Tpr1g3176 388 PANTHER AMINO-ACID AMINOTRANSFERASE 65 387 - -
Tpr1g3176 388 Pfam Amino-transferase class IV 119 349 IPR001544 GO:0003824
Tpr1g3176 388 Gene3D - 211 381 IPR043132 -
Tpr1g3176 388 Gene3D - 65 206 IPR043131 -
Tpr1g3176 388 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 65 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3176 Tpr-Chr1 36225705 36231806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3176 K18482 - gmx:100794026 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3176 1 36225705 36231806 Tpr1g3176 1 36225705 36231806 ECH