Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3163 ATGGTAATTGTTGTTGTACTACTGCATCAACATCATCAAATATGTGATGCAACTACTATTACTAATAACCAAACTTATTGTCCACCTTCTTCATGCGGCAAAATCACAAACATAACACATCCATTTCGTCTTAAGGATGATCCAACAACATGCGGTGATACAAGATACGAGTTATCCTGCGAAAACAACATGACAGTATTAACTTTGTTTTCGGGTAAATACTATGTGAAATCAATTAACTACAACAACTACACAATTCGGTTAATTGATCCCGGAATTCAAGAGGAAGATTGCTCCTCTATTCCTCGCTATTACTTATACGCTTCTAATTTCACAAGTTATTACAATTATAGCAACTACCAGAAAGATCCATATAAAACCTCACAGATCAGAATAATTCCTAGTACCGGATATTATCTTTATCTTGATACTAGAAGATTACCAATGTTCCAGCACGTAATTTACATGAATTGTAGCAATCCTGTACGGCATAATCCAGTGTATGCAGACGCAGCTTCTTGCATCAAGTCAAATTCACAAAGTGGCCATGTTTATGCCATTGCTGGAGATTTGAAGGTCAGCAACTTACAAGATGATGACTGCCGCGTGGAGTTAGTTACGGCTATATCATTCTTCCATTTTAATTACAGCCATCCTCATTGGAATATTCCGATTAAAAAGTATTCGTACAATGAAATTCATAAGATGTTGGTGGGTGGATTCGAGGTTTCTTGGATGAGTGCTTCTTGTCAAGATCTTTGTGGAGAATCAGATTGCTATTTAAGTGAAATCACAGGGACTCTTCAATGTGACTATCTGGCTGATCATTGCATAACTACATTGGGATTTCATGTAGGTTGTGGACCTCCATCAAAGCTGCGAATGTTTGTCGAAGGTATTATATACGGCATTGCCAGAGGTAATTTTTTACTTTAA 936 0.3697 MVIVVVLLHQHHQICDATTITNNQTYCPPSSCGKITNITHPFRLKDDPTTCGDTRYELSCENNMTVLTLFSGKYYVKSINYNNYTIRLIDPGIQEEDCSSIPRYYLYASNFTSYYNYSNYQKDPYKTSQIRIIPSTGYYLYLDTRRLPMFQHVIYMNCSNPVRHNPVYADAASCIKSNSQSGHVYAIAGDLKVSNLQDDDCRVELVTAISFFHFNYSHPHWNIPIKKYSYNEIHKMLVGGFEVSWMSASCQDLCGESDCYLSEITGTLQCDYLADHCITTLGFHVGCGPPSKLRMFVEGIIYGIARGNFLL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3163 311 Pfam Wall-associated receptor kinase galacturonan-binding 27 90 IPR025287 GO:0030247
Tpr1g3163 311 PANTHER OS01G0690200 PROTEIN 2 255 - -
Tpr1g3163 311 PANTHER OS01G0113900 PROTEIN 2 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3163 Tpr-Chr1 36097811 36099012 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3163 - - mtr:MTR_1g027050 422.935