Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3111 ATGGCAGAAAGCCTTCGTTTGGCTGTTGCTGTTATTGGAAATGTTGCCTCAGTGTCCCTTTATGCTGCACCAATTGTTACTTTCAAAAGGGTCATAAGGAAAAAAAGCACTGAGGAATTTTCATGTGTTCCTTATATCATAGCATTATTGAACTGTCTCCTTTTCACTTGGTATGGATTGCCAGTAGTTAGCTACCAGTGGGAAAATTTTCCTCTTGTTACTGTTAATGGAGTTGGGATTGTTTTGGAGCTAGCTTATGTTCTAATTTATTTTTGGTATTCTACACCCAAAGGAAAGGTGAAGGTAGCTATGGTAGCTTTACCAATTCTTCTAGGGTTCTGTGCCATTGCTCTTGCATCAGCTTTTGCCTTCCCTGATCATCGTCACAGAAAGTTACTTGTTGGTAGCATTGGTTTGGGGGTTTCAATAGCAATGTATGCTTCCCCTTTGATTGTTATGAAGAAAGTGGTACAAACAAAGAGTGTGGAATTCATGCCACTACCCTTATCATTGTGTTCATTCTTAGCAAGTGTATTGTGGCTTACATATGGACTTCTCATTAGGGATATATTCGTTGCGGGACCAAGTGTGATTGGAACTCCCTTAGGAATCCTACAGCTGGTTCTCCACTGCAAATATTGGAAAAGAAAAGTTGTTATTGAAGAACCAAACAAAGTGGATCTTCATAAGCTTGGAAACCTCGAGAATTTGGACATGGAAAAGGGTGGTTTAGAAAAGGGGAAACTTGGAAATGAATGTGACAAAAACACAACTTGTGATGTGTGA 786 0.3957 MAESLRLAVAVIGNVASVSLYAAPIVTFKRVIRKKSTEEFSCVPYIIALLNCLLFTWYGLPVVSYQWENFPLVTVNGVGIVLELAYVLIYFWYSTPKGKVKVAMVALPILLGFCAIALASAFAFPDHRHRKLLVGSIGLGVSIAMYASPLIVMKKVVQTKSVEFMPLPLSLCSFLASVLWLTYGLLIRDIFVAGPSVIGTPLGILQLVLHCKYWKRKVVIEEPNKVDLHKLGNLENLDMEKGGLEKGKLGNECDKNTTCDV* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3111 261 Gene3D - 10 107 - -
Tpr1g3111 261 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Tpr1g3111 261 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016021
Tpr1g3111 261 PANTHER RAG1-ACTIVATING PROTEIN 1 4 241 - -
Tpr1g3111 261 Gene3D - 132 226 - -
Tpr1g3111 261 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3111 Tpr-Chr1 35619937 35622515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3111 1 253 Miscellaneous Gene Families AT5G53190 53.077 1.80e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3111 K15382 - gmx:100785477 413.69