Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3094 ATGAGGGGTCCTACCCCGAACACCGTTGAGCCACGTCACCGATTATCAACTTCATTCAGTGAAGATACTACCAAGAGAAGGTCTCAGAAAAATAAGGACTTTAAAGATGTTGAGAAAGCATCACATGTTCCGTTCCTAGAAAGGAGTATAAATTGCAGGCCGAATTGGAAATTTGTTTTGGTTATTATTATCTTGGGAACCTTGCTTACCATTTTCCACCCTCCAGCTGTTTATAATACTGATCATATATCACGGACAACATTTGTGAACAACTTGAATGGAGAGCTCGATGGAACTGATCCCCGTTATGCGTCATTTCTAAACATCGACTGGAACCAAATAACTAATGTTCTTGAAAATTTGAAGGATAAGGACACATATCAGGGTGTTGGCGTATTAAACTTCAATGATAGTGAGATTGACCACTGGAAGCAGCTAGTACCAGAATCAGAGCATGTAGTCCTTCACCTGAACTATGCTTCCAGTAACATTACATGGGAGGACTTATATCCAGAATGGATCGATGAAGAAGAAGAATATGAGTTTCCTATGTGTCCAACACTACCTAGGATTCAGGCACCAGGAAAACCACGGCTTGATCTTATTGCTGTTAAGCTTCCCTGCGATAAGTCAGGGCGCTGGTCAAGAGATGTAGCTCGTTTCCACCTGCAGATTGAAGCAGCAAGACTTGCTGCCACTTCCAAAGGGTTTCGCCCAGTGCGTGTGCTTTTTGTAACTGACTGTTTCCCAATTCCAAATCTCTTTACTTGCAAGGATGTTATACAGCGTGACGGAAATGCCTGGCTTTACGAACCCGACCTGCATAAACTCAGAGAGAAGCTGCAGTTACCAATTGGTTCATGTGAACTATCAGTTCCTCTGAAGGCTAAAGAAAATTTTCACTCTGAAAGGGCACACCGAGAAGCTTATGCAACTATACTGCACTCTGCACATATATATGTTTGTGGAGCCATCACTGCAGCTCAAAGTATTCGAATGTCTGGTTCAACACGCGATCTTGTAATTCTTGTTGATGAAACAATCACTGATTATCATAGGGAGGGCTTGGCAGCAGCTGGATGGAAGATCCACACGATTAAAAGAATCAGGAATCCGAAAGCAGAACCGGAGGCATATAACGAGTGGAACTACAGCAAGTTCCGTCTCTGGCAGTTAACAGATTATGACAAAATCATTTTTATTGACGCCGACCTTCTTATACTCAGAAATATCGATTTCCTTTTTGAAATGCCTGAAATATCAGCCATAGGAAACAATGCTACACTGTTCAACTCAGGTGTTATGGTGGTTGAGCCGTCAAATTGTACATTTCAACTCCTTATGGATCACATCAATGAGATTGTGTCATACAACGGTGGGGACCAGGGTTATCTAAATGAAATTTTCACCTGGTGGCATCGGATTCCAAAACACATGAACTACTTGAAGCACTTCTGGGAAGGTGATGAGGAAGAGAAGAAGGCAACAAAAACTCGTCTCTTTGGAGCTGATCCACCGATCCTTTATGTCATCCACTATCTAGGTAATAAGCCATGGCTTTGTTTCCGAGATTATGACTGCAACTGGAACGTGGACATTCTTCAGGAATTTGCAAGCAATGTAGCTCATGCAAGGTGGTGGAAGGTTCATGACGCCATGCCAGAAAATTTGCAGAAGTTCTGTTTACTTAGATCGAAGCAGAAGGCGGCATTAGAGTGGGATCGTAGACAAGCCCAGAAAGGAAACTACAGTGATGGTCACTGGAAAATTAAGATAAAAGACCCGCGTTTGAAAACATGTTTCGAGGATTTCTGCTTCTGGGAGAGTATGTTATGGCATTGGGGTGAAAAGAATTGGACAGATAATTCTACTGTTAACAATTTACCACCTGCTGTCAAAACCAAATCTCTATCTTCTTTATGA 1923 0.4223 MRGPTPNTVEPRHRLSTSFSEDTTKRRSQKNKDFKDVEKASHVPFLERSINCRPNWKFVLVIIILGTLLTIFHPPAVYNTDHISRTTFVNNLNGELDGTDPRYASFLNIDWNQITNVLENLKDKDTYQGVGVLNFNDSEIDHWKQLVPESEHVVLHLNYASSNITWEDLYPEWIDEEEEYEFPMCPTLPRIQAPGKPRLDLIAVKLPCDKSGRWSRDVARFHLQIEAARLAATSKGFRPVRVLFVTDCFPIPNLFTCKDVIQRDGNAWLYEPDLHKLREKLQLPIGSCELSVPLKAKENFHSERAHREAYATILHSAHIYVCGAITAAQSIRMSGSTRDLVILVDETITDYHREGLAAAGWKIHTIKRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVVEPSNCTFQLLMDHINEIVSYNGGDQGYLNEIFTWWHRIPKHMNYLKHFWEGDEEEKKATKTRLFGADPPILYVIHYLGNKPWLCFRDYDCNWNVDILQEFASNVAHARWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAQKGNYSDGHWKIKIKDPRLKTCFEDFCFWESMLWHWGEKNWTDNSTVNNLPPAVKTKSLSSL* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3094 640 MobiDBLite consensus disorder prediction 1 35 - -
Tpr1g3094 640 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 558 IPR029044 -
Tpr1g3094 640 MobiDBLite consensus disorder prediction 15 35 - -
Tpr1g3094 640 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 14 621 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Tpr1g3094 640 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 556 IPR029044 -
Tpr1g3094 640 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Tpr1g3094 640 PANTHER GLYCOGENIN SUBFAMILY MEMBER 14 621 - -
Tpr1g3094 640 CDD GT8_Glycogenin 308 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3094 Tpr-Chr1 35451669 35456701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3094 4 616 Glycosyltransferase AT1G77130 68.498 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3094 K20890 - gmx:100787339 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3094 1 35451669 35456701 Tpr1g3094 1 35451669 35456701 ECH