Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3091 ATGCATATTGAAACATGTCACTACATTAAGACACTTCCATCAACATGGAACATTCCAAAAAACCACCGAATACATCGCCACCTATTACCACCACCAAGATCCACTATCATTGCCACACCACCACCGTCGCTAAAACTATCCAAAACACACACAATGCCACCAGAAAAACTTGAAATTTTCAAATCATTAGAAAATTGGGCATCTGAATCTGTTTTACCATTGCTTAAGCCTGTGGAACAATGCTGGCAGCCACAGAATTTTCTCCCGGATCCTTCGTTGAAATTCGATGAATTTACTGATCAGGTGAAGGCCCTTCGTGATCGTACAAAGGATCTTCCTGATGAGTATTTTGTTGTGTTGGTTGGTGATATGGTGACGGAAGACGCACTTCCGACATATCAGAGTATGATTAATGGTCTTGATGGTGTTGGTGATGAGATTGGTTCGAGTCCAAGTCCGTGGGCTATTTGGACACGGGCTTGGACTGCTGAAGAAAATAGACATGGAGATTTGCTTAGGAGTTATTTGTATCTTTCTGGTCGGGTTGATATGGAGAAGATTGAGAAAACTGTTCAGTACCTCATTGGTGCTGGCATGGACCCAGGGACAGAAAACAACCCATACTTGGGATTTGTATACACATCATTCCAAGAGCGAGCGACATTTGTATCACATGGTAACACGGCTCGCTTAGCGAAAGAAGGTGGTGATCCCGTGCTTGCACGCATATGCGGTACCATTGCGGCAGATGAAAAGCGTCATGAGAATGCATACTCAAAAATCGTGGAGAAGCTTCTAGAAGTGGACCCTAATGGAGCAATGCTAGCCATTGGTGATATGATGGAGAAAAAAATCACAATGCCAGCACACCTTATGTACGATGGACAAGACCCTAAGCTATTTGAGCACTTTGCGGCCGTTGCGCAGCGTACCGGAGTGTACACGGCCAATGATTATGCTGATATCTTGGAGTTTTTAATCGAACGGTGGAGATTGGAGAAGCTGGAAGGACTAACGAGCGAGGGGAAAAAGGCGCAGGATTTCGTGTGTGGGCTAGCGCTGAGGATTAGGAGGCTGCAAGAGCGTGCTGATGCACGCGCTCGTAAGATGAAACCACATGGGGTTAAGTTTAGTTGGATTTTCAATAATGAGGTTATTTTGTAA 1164 0.4476 MHIETCHYIKTLPSTWNIPKNHRIHRHLLPPPRSTIIATPPPSLKLSKTHTMPPEKLEIFKSLENWASESVLPLLKPVEQCWQPQNFLPDPSLKFDEFTDQVKALRDRTKDLPDEYFVVLVGDMVTEDALPTYQSMINGLDGVGDEIGSSPSPWAIWTRAWTAEENRHGDLLRSYLYLSGRVDMEKIEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHENAYSKIVEKLLEVDPNGAMLAIGDMMEKKITMPAHLMYDGQDPKLFEHFAAVAQRTGVYTANDYADILEFLIERWRLEKLEGLTSEGKKAQDFVCGLALRIRRLQERADARARKMKPHGVKFSWIFNNEVIL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3091 387 SUPERFAMILY Ferritin-like 44 386 IPR009078 -
Tpr1g3091 387 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 38 386 - -
Tpr1g3091 387 CDD Acyl_ACP_Desat 55 363 IPR005067 GO:0006631|GO:0045300
Tpr1g3091 387 PIRSF Dlt9_acylACP_des 24 387 IPR005067 GO:0006631|GO:0045300
Tpr1g3091 387 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 38 386 IPR005067 GO:0006631|GO:0045300
Tpr1g3091 387 Gene3D Ribonucleotide Reductase, subunit A 39 387 IPR012348 GO:0016491
Tpr1g3091 387 Pfam Fatty acid desaturase 55 381 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3091 Tpr-Chr1 35443642 35447159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3091 5 385 Acyl Lipid Metabolism Gene Families AT1G43800 73.107 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3091 K03921 - gmx:100037478 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3091 1 35443642 35447159 Tpr1g3091 1 35443642 35447159 ECH