Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3090 ATGGTGACAGGACAAGATTTATACAACGTGATGTGTTCAATGGTACCATTATATTTTGCAATGTTAGTTGCTTACGGTTCAGTAAAGTGTTGCAAAATGTTCACTTCAGATCAATGTTCAGGCATAAACAGATTTGTGGCAGTTTTTGCTGTTCCAGTTCTATCTTTTCATTTCATTTCTCTCAATAATCCTTATCAAATGGACATTAAATTCATCTTAGCTGATACAATTTCTAAGCTTATTGTTCTCTTTTTACTTTCCATTTGGGCTATTTTCTTTACTAAAGGCTCATTGGATTGGGTTATAACTTTGTTCTCAGTTGCTACTTTGCCTAATACCCTTGTTATGGGTATCCCTTTACTTCAAGCTATGTATGGTGATTTCACTCAAAGTCTCATGGTGCAACTAGTTGTCCTTCAATGCATCATATGGTATACTCTACTTCTCTTCCTATTAGAATACAGAGCAGCCAAACTCTTGATCAAAAACTCATTCCCAGGAACCACAGCAGCCTCCATAGAAAAATTTGAACTCGACAGCGACGTAATTTCCCTCTATGGCCATGACGCGCCGCTGACAACCCAATCAGAAACTGATGAAAACGGACGAATCAAAGTTCGAATTCGACGATCAATTTCCTCAGCACCACCAGGATCAACCTCATCAATAACCAACACCATTACACCTACAAGACTCTCTAATCTTTCCAATGCCGACATTTTCTCCATCAACACACCGATGAATTTTCTCGACAATGCCAGTCCACGTCTCTCCGGTTATGCCTCGACCGATGCTTATTCGTTGCAGCCAACACCTCGGAGGTCTAATGTTAATGAAATGGATGTGATTGGTACACCGATGTTGGGGAGGTCGCCGGTGGGTGGAAGGAGGGGTTTAAGGGGGGATTCGCCGGTGGTGGATCGAGGGAGGGTGGTTTGGGAGTCACCGGAGAAATGGTGGGATGAAGAGAGACAAGGATGCAAGGACATTACTATGTCAGATAGGGAAATTAGCTTCAGAGACAGCCTCAAAGTCTCAATGGCAGAGGAAGCTGTGGACCCTAAAAATGAAATTGAGAGTAACCAGAAAATGCCATATGCCTTTGTAATGTTAAGGCTTATACTTATTGTAGTTGGAAGAAAACTTTCTCGTAATCCTAATACATATTCTAGTCTATTAGGACTTCTCTGGTCCCTAATCTCCTTCAAATGGAATATAGAAATGCCTAGTTTGATCAAATCATCTATCAAAATCATATCTGATGCAGGTCTTGGGATGGCAATGTTTAGCTTAGGGCTTTTCATGGCACTTCAGCCTCATATTATTGCCTGTGGTACTAAAAGAGCAGCAATGGGAATGGGCATCAGATTCCTATGTGGTCCTCTTGTAATGTCATTATCATCCATTGCCATTGGATTGAGAGGGAAAAAACTGCATACTGCCATTGTACAGGCTGCTCTTCCACAAGGGATAGTGCCATTTGTATTTGCAAGAGAATATGGGCTGCATCCTGATATTTTAAGCACAGGGGTTATCTTTGGCATGTTAGTTTCCTTGCCAATAACTCTCATTTACTACATATTTCTTGGCTTGTGA 1596 0.4117 MVTGQDLYNVMCSMVPLYFAMLVAYGSVKCCKMFTSDQCSGINRFVAVFAVPVLSFHFISLNNPYQMDIKFILADTISKLIVLFLLSIWAIFFTKGSLDWVITLFSVATLPNTLVMGIPLLQAMYGDFTQSLMVQLVVLQCIIWYTLLLFLLEYRAAKLLIKNSFPGTTAASIEKFELDSDVISLYGHDAPLTTQSETDENGRIKVRIRRSISSAPPGSTSSITNTITPTRLSNLSNADIFSINTPMNFLDNASPRLSGYASTDAYSLQPTPRRSNVNEMDVIGTPMLGRSPVGGRRGLRGDSPVVDRGRVVWESPEKWWDEERQGCKDITMSDREISFRDSLKVSMAEEAVDPKNEIESNQKMPYAFVMLRLILIVVGRKLSRNPNTYSSLLGLLWSLISFKWNIEMPSLIKSSIKIISDAGLGMAMFSLGLFMALQPHIIACGTKRAAMGMGIRFLCGPLVMSLSSIAIGLRGKKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPITLIYYIFLGL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3090 531 TIGRFAM 2a69: auxin efflux carrier 1 531 IPR014024 -
Tpr1g3090 531 PANTHER AUXIN EFFLUX CARRIER COMPONENT 6 1 531 - -
Tpr1g3090 531 Pfam Membrane transport protein 10 526 IPR004776 GO:0016021|GO:0055085
Tpr1g3090 531 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3090 Tpr-Chr1 35433911 35442430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3090 1 509 Organic Solute Cotransporters AT1G77110 61.812 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3090 K13947 - gmx:100800139 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3090 1 35433911 35442430 Tpr1g3090 1 35433911 35442430 ECH