Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3089 ATGTGGAGTTCAAACAGTAACAACAAATCAAGAACAATGCATCATCATCATCAACATCATCCACTATGCACACGCACGCACCAGATCGGCGCCTTACTCTTAGTTATCGCAACCTTCTTCTTCACGAGACTCTTAGACGCTCCTTGTAGAATCTCCCCCACCGTGTCGTCGCAACGGAAATTCCTTCTGTTACCGGAATCTCAAGAAGTTTCGATTAAGATCTATGTTTATGATGTTAATGAGATCGATGGATTGAATGAACTTTTGAAAGGAAGAGATGGTAAGATTGCTCCTGAAGCTTGCTTGAAAGGCCAGTGGGGTAGTCAGGTAAAAATACACAAGTTACTTTTAGAATCAAGATTCAGGACGAAAAAGAAGGAGGAAGCAGATCTGTTTTTTGTTCCATCTTATGTTAAATGTGCACGTATGATGGGCGGACTTAACGACAAAGAAATTAATAACACTTTTGTTAAAGTTATTAGCCAAATGCCTTATTTTCGGTTATCTGGAGGCAGGAACCACATATTTGTTTTCCCAAGTGGAGCTGGTGCTCACTTGTTCAAGTCTTGGGCAACATATATAAATCGCTCCATTATTCTTACACCTGAGGGGGATCGCACTGATAAGAGAGATACTAGTGCTTTTAATACATGGAAAGATATAATCATTCCAGGTAATGTCGAAGATGGTATGACCAAGACTGGGTCTCCCATGATCCAGCCTTTGCCTCTGTCTAAGCGGAAGTACTTGGCAAATTATTTAGGACGTGCACAAGGAAAAGCTGGCCGTCTGCAGCTAATAGAGCTTTCAAAACAATTCCCAGAGAAGTTGGAATGTCCAGATTTGAAATTTAGTGGAGGTGAAAAGCTGGGAAGGAAAGATTATTTTGAACACCTGCGCAACTCCAAGTTTTGCCTCGCTCCACGTGGGGAGTCATCTTGGACCCTTCGCTTTTATGAGTCCTTTTTTGTGGAATGTGTTCCAGTTATATTGTCAGATCAAATAGAATTGCCGTTCCAGAATGTCATCGATTACAGTCAAATATCAATAAAGTGGCCATCCAGTCGAATAGGTCCAGAACTATTGGAGTATTTGGAATCCATTCCAGATAAAGACATAGAGGCAATAATAGCTCGTGGTCGACAAGTTAGGTGCATGTGGGTCTATGCTTCAGATTCAGAATCTTGTTCGGCAATGCGTGGAATCATGTGGGAACTGCAAAGGAAAGTAAGGCAGTTTCACCAATCAGCTGAAACATTTTGGCTGCACAATGGATCATTTGTAAACAGAAACTTGGTCGAATTTTCTAAATGGAAACTCCCTGTACCTTTGCCTTGA 1338 0.4141 MWSSNSNNKSRTMHHHHQHHPLCTRTHQIGALLLVIATFFFTRLLDAPCRISPTVSSQRKFLLLPESQEVSIKIYVYDVNEIDGLNELLKGRDGKIAPEACLKGQWGSQVKIHKLLLESRFRTKKKEEADLFFVPSYVKCARMMGGLNDKEINNTFVKVISQMPYFRLSGGRNHIFVFPSGAGAHLFKSWATYINRSIILTPEGDRTDKRDTSAFNTWKDIIIPGNVEDGMTKTGSPMIQPLPLSKRKYLANYLGRAQGKAGRLQLIELSKQFPEKLECPDLKFSGGEKLGRKDYFEHLRNSKFCLAPRGESSWTLRFYESFFVECVPVILSDQIELPFQNVIDYSQISIKWPSSRIGPELLEYLESIPDKDIEAIIARGRQVRCMWVYASDSESCSAMRGIMWELQRKVRQFHQSAETFWLHNGSFVNRNLVEFSKWKLPVPLP* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3089 445 PANTHER EXOSTOSIN FAMILY PROTEIN 14 434 - -
Tpr1g3089 445 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 14 434 IPR004263 GO:0006486|GO:0016757
Tpr1g3089 445 Pfam Exostosin family 71 357 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3089 Tpr-Chr1 35412118 35419846 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3089 - - gmx:100814029 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3089 1 35412118 35419846 Tpr1g3089 1 35412118 35419846 ECH