Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3088 ATGGATATTGCTCATTTTGTATTCGGATTATTTGGAAATGCTTTTGGTCTTTTTCTCTTCTTGGCTCCAATAATCACTTTCAAGAGAATTATTGTGAACAAATCAACAGAGAAATTCTCAGGTGTTCCTTACACTATGACACTTCTCAACTGTCTTCTTTCTGCTTGGTATGGTTTACCATTTGTGTCACCAGACAACATGCTTGTAACAATCATCAATGGAGCAGGAGCAGTTATTGAAATCATATATGTTTTCACTTTCATCTTGTTTGCACCTAAAAAGGAGAAGTTGAAAATAAGTGGCTTATTTGCCATTGTGATGACAATTTTCTCTGCTGTTGTTTTCATCTCTCTGTTTGCTCTTCATGGTAATTCAAGGAAAGTGTTTTGTGGTTTTGCTGCTGCAATATTTTCCATCATTATGTATGGTTCACCACTCTCAATTATGAGATTAGTGATCAGAACCAAAAGTGTGGAGTTCATGCCATTCTTCCTTTCACTATTTGTGTTTCTTTGTGGTACCTCATGGTTTGTCTTTGGTCTATTGGGTCGTGACCCATTTATTGCAGTACCAAATGGTGTAGGGTCAGCATTAGGGACATTGCAACTAATATTGTATTTCATATATCGTAAGAATAAAGGAAATGCAAAAACAAAAACAACACAAGAAGAATCAATGGAAATGGGCACCGCAAAACCATCCAAAAATGCAATGGGAGATGAAGAAGAACTCAAAGGGGACACGTCTTAG 750 0.3667 MDIAHFVFGLFGNAFGLFLFLAPIITFKRIIVNKSTEKFSGVPYTMTLLNCLLSAWYGLPFVSPDNMLVTIINGAGAVIEIIYVFTFILFAPKKEKLKISGLFAIVMTIFSAVVFISLFALHGNSRKVFCGFAAAIFSIIMYGSPLSIMRLVIRTKSVEFMPFFLSLFVFLCGTSWFVFGLLGRDPFIAVPNGVGSALGTLQLILYFIYRKNKGNAKTKTTQEESMEMGTAKPSKNAMGDEEELKGDTS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3088 249 MobiDBLite consensus disorder prediction 217 249 - -
Tpr1g3088 249 Gene3D - 7 97 - -
Tpr1g3088 249 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Tpr1g3088 249 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016021
Tpr1g3088 249 Gene3D - 127 224 - -
Tpr1g3088 249 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 238 IPR018180 GO:0051119
Tpr1g3088 249 PANTHER RAG1-ACTIVATING PROTEIN 1 4 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3088 Tpr-Chr1 35402755 35405646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3088 1 190 Miscellaneous Gene Families AT1G21460 74.737 5.30e-104 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3088 K15382 - gmx:100800304 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3088 1 35402755 35405646 Tpr1g3088 1 35402755 35405646 ECH