Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3071 ATGACCGACAGCAACTCCAATCCCGACCCCGGCGCCGCCGCTAGCGATTCGTCGCGACCTTCATCCGCGTCGACGTGCATCAGAATAGGTGATCGACAACTTTTCAAAGTTGAGCTCCGACCAGGTGAGACCACAATTGTATCGTGGAAGAAGCTTCTGAAAGACGCCAATAAGGATAACAATGGATCCACTTCAGCTCCTGAGCAAGTTCCGAAGGCGAACCCTGCGCTCGAAGCTAGAATCGCTCCTGGACAAACTGAGAAGAAAGAAGAAGATGCTCCCCAGACCAACCGGTTCAGTGCTGTAATAGAGAAAATTGAACGGCTTTACATGGGTAATGATAGTAGTGATGAGGAGGATCTACCTGTTGTTCCTGATGATCAGTATGACACAGAAGACTCTTTCATTGACGATGCTGAGCTGGATGAGTATTTTGAAGTTGATAATTCTGCAATCAAACATGATGGTTTCTTTGTCAATAGGGGGAAATTGGAACGCATTGAACCTCCGGCGTTACCTAATCCGCCAGCAAAGAAAAGGTGCCGGAAAGATACATTGAAGAATCCAGGTGAGAATGTTGATGGACATGTATCAAATAAACATGCAAAAGTGGGAAAGACGGCTGCTGGAAAAACTGCATCATTACCTGCGAAGAATACATTTAATTCCTTACAGAATTTGGCTGTACCTGGTGAAGATTTGAAACCTCAGAATCAATCGGAGATCTCTGGAATAACTTTGAAAAAGAAAACGACTGATAGTAGACCAATTTCAAATCCGTCTGTCTGTTTGAAAGAATCCAATAATGATGTCCCTTCTGTGGTTATCTGTTTGAACGTGCCTTCTGTAGCAGAAGTCAAAGCTGCTGACAATCAGACTACAGGAGTACTCCAATCTAAGAACAGAGTGGATAAATATAACGATGCAAGTGGAGTGCTTGATACTTCTCATCAAAAGTACCAAGAAAAGGGTGTTTCTTCCAAATCCCAACCTGGAAGAACCCCAAGTAGTGTTGATGGTTTAGAAAATACAGGTGGATCAAAAGATAAAAATGGCATCAATGAGCTACCAGAACTTAACTTGTCTGGGGGAAAATCTGTGATGCAAGGACCAAAATCTAAAAACATATTCAAAAAAGATAGCTCCAGTGTGAGGTCAAAATCTACAATTCTTGAGAAAGCTATTCAAGATTTGGAGAAAGCGGTCACAGAATCAAGGCCACCAACTATGGAAAACCAGGAGGTTGATAGCACATCCCAAGCTATCAAACGGAGATTACCCAGAGAAATAAAGCTAAAACTTGCTAAAGTTGCGAGATTAGCGGCAAGCCAAGGGAAAGTATCACAGGAGTTAATTAATCGTCTTATGAGTATTCTTGGGCACCTGATTCAGCTCAGAACACTAAAGAGAAACTTAAAAATTATGATCAATGTGGGTTTGTCTGCAAAGAAAGAGAAACATGATAGGCTTGAACAAAAAAAGAAGGAAGTTGTTGAGATGATAAAGATGCAGGCGCCATCTATTGAATCTGAGCAACAGCAGCAAGCTGGAGTATCTGGTGATGAAGAATTGGGTCCTGATGGAAAAGCAATACCTAAAAGTAATTTTAGTATGGACACTGCATTGGAAGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGATTGGATGAAACTGCAGGTCCCCTAGTCAGAAAGTTGTATTGTGATCTAGCAGAACTATGGCCAAATGGTTGCATGGACAACCACGGGATCAAACGTGCAATTTGCAGGGCAAAAGAGAGGCGCAGAGCACTACACAATAGAAATAAGGATCAGGAAAACATTAAGAGGGAAAAGTTACTGGTACCTAAGCAGGAGGAGAATGTTCAATCTGATGATGGTTTTCCAGTTCCACCGGTTGCTAGTTCACAACAGAACGTGCGAAAGCGATTAGCTCCAGAATCTAACAGTCATTCTTCATTGAATAAGGGTGTTTCTAATACAGTTACAGATGCCCAGGTTCTCCACCCCCCTGTGAATGGTCCGAAAAAAGAAAAAGCAAAGGGGAGTTCAAGCCGTTCCCCAGATGATGTCAGGGTTGCAGGCAGTGCATTGATTAAAAAGAGAAAGACAGAAAATGAGTTGGAAGGAACTCATTTTCGCCCTGAGAAGCTGGCTTCTTCGAAGGGAGAAGAAAGACATAGGCCTCTGAAGCAGTCTGCAGTTGTTCCCTCCAAATCAAACCTTCACCGAGCATCACAACCCAGTGTTGAACAATCAAGCTAA 2271 0.4267 MTDSNSNPDPGAAASDSSRPSSASTCIRIGDRQLFKVELRPGETTIVSWKKLLKDANKDNNGSTSAPEQVPKANPALEARIAPGQTEKKEEDAPQTNRFSAVIEKIERLYMGNDSSDEEDLPVVPDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERIEPPALPNPPAKKRCRKDTLKNPGENVDGHVSNKHAKVGKTAAGKTASLPAKNTFNSLQNLAVPGEDLKPQNQSEISGITLKKKTTDSRPISNPSVCLKESNNDVPSVVICLNVPSVAEVKAADNQTTGVLQSKNRVDKYNDASGVLDTSHQKYQEKGVSSKSQPGRTPSSVDGLENTGGSKDKNGINELPELNLSGGKSVMQGPKSKNIFKKDSSSVRSKSTILEKAIQDLEKAVTESRPPTMENQEVDSTSQAIKRRLPREIKLKLAKVARLAASQGKVSQELINRLMSILGHLIQLRTLKRNLKIMINVGLSAKKEKHDRLEQKKKEVVEMIKMQAPSIESEQQQQAGVSGDEELGPDGKAIPKSNFSMDTALEDKICDLYDLFVDGLDETAGPLVRKLYCDLAELWPNGCMDNHGIKRAICRAKERRRALHNRNKDQENIKREKLLVPKQEENVQSDDGFPVPPVASSQQNVRKRLAPESNSHSSLNKGVSNTVTDAQVLHPPVNGPKKEKAKGSSSRSPDDVRVAGSALIKKRKTENELEGTHFRPEKLASSKGEERHRPLKQSAVVPSKSNLHRASQPSVEQSS* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3071 756 MobiDBLite consensus disorder prediction 1 25 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 697 734 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 506 527 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 310 381 - -
Tpr1g3071 756 Coils Coil 480 500 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 177 194 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 602 621 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 310 350 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 632 669 - -
Tpr1g3071 756 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 23 756 - -
Tpr1g3071 756 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 23 756 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 602 756 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 58 99 - -
Tpr1g3071 756 Pfam HPC2 and ubinuclein domain 126 165 IPR014840 -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 173 194 - -
Tpr1g3071 756 MobiDBLite consensus disorder prediction 736 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3071 Tpr-Chr1 35207837 35220022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3071 - - mtr:MTR_1g029680 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3071 1 35207837 35220022 Tpr1g3071 1 35207837 35220022 ECH