Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3068 ATGAAAGTGACATGGAAGAACACCAAGAAGAAGAAACCTTCTTTGCCTCCGTTATCACACTTTGAGCTCGACAACGACCCTAACAATGATGACACTCCTGATGGAAGAACAGTGCGTTCTCCCAATTCTGATCAATCAACACAATTAGCTATGCAATTTCAAGCTCAAGGAGACAATCTTGCTATGGAGGGGAAGTATAGGGAAGCACTTGGTAAATGGGAAACTGCTATTACATTGGCTCCTGATGTTCCAGTTTTGCATGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGAAGCTTGGAATGCTTTAAAGGCTGCAATTCGAGCTACGGGATTGAAACCATCGTGGGCTGAGGCTTGGGTCACACTTGGCAGAGCACAGCTGAATTACGGCGAGCCAGATAATGCCATTGAAAGCTTTGACAGAGCTTTAGCTCTCAAGCCTGATTATGAAGAAGCACAAGATGATAGAAAAACTGCGTTACGTCTTGTAAAGAAAAGAAAGCAACTTCACTCATCAGGTTTGAGTGACATTCAAAATCGTTATACTGTAGGTGATAAGAATGAAAGCACATGA 579 0.4231 MKVTWKNTKKKKPSLPPLSHFELDNDPNNDDTPDGRTVRSPNSDQSTQLAMQFQAQGDNLAMEGKYREALGKWETAITLAPDVPVLHEQKAQVLLEIGEAWNALKAAIRATGLKPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDRKTALRLVKKRKQLHSSGLSDIQNRYTVGDKNEST* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3068 192 SUPERFAMILY TPR-like 47 169 IPR011990 GO:0005515
Tpr1g3068 192 MobiDBLite consensus disorder prediction 170 192 - -
Tpr1g3068 192 MobiDBLite consensus disorder prediction 1 46 - -
Tpr1g3068 192 ProSiteProfiles TPR repeat profile. 118 151 IPR019734 GO:0005515
Tpr1g3068 192 SMART tpr_5 84 117 IPR019734 GO:0005515
Tpr1g3068 192 SMART tpr_5 50 83 IPR019734 GO:0005515
Tpr1g3068 192 SMART tpr_5 118 151 IPR019734 GO:0005515
Tpr1g3068 192 Pfam Tetratricopeptide repeat 118 151 IPR001440 GO:0005515
Tpr1g3068 192 Gene3D Tetratricopeptide repeat domain 40 183 IPR011990 GO:0005515
Tpr1g3068 192 ProSiteProfiles TPR repeat region circular profile. 118 150 - -
Tpr1g3068 192 PANTHER OSMOSIS RESPONSIVE FACTOR 1 190 - -
Tpr1g3068 192 MobiDBLite consensus disorder prediction 174 192 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3068 57 162 EF-hand Containing Proteins AT2G32450 33.962 4.80e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3068 - - pvu:PHAVU_001G066600g 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3068 1 35159049 35162680 Tpr1g3068 1 35159049 35162680 ECH