Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3064 ATGGATTGTAAAATCAAAATACCATTTCTCACGCTTTTTCTTTTTCTGCTATTTTCTTCCATTTTCCCACTCACTTTCTCAGCTGCCAATAAACCCCTTAACACCGATAAGCTCCACCGACGTGGTTCCTCTACCGTTTTCCGTGTTCAAGGGAATGTTTACCCTCTAGGGTATTATACAGTGTCTCTCAAGATTGGCAATCCTCCAAAACCTTATGACCTTGATATTGACTCAGGTAGTGACCTCACTTGGGTTCAGTGTGATGCACCATGTAAAGGTTGCACTAAGCCTAATCATCAGCTTTATAAACCCAGCAACAACCTTGTGCAATGTGTGGACCAGTTATGCGCTGGAGTGCATTTGACATCAGACCATCACTGTGATACCCCAGATGATCAGTGTGATTATGAGGTTGAATATGCAGATCATGGATCGTCTCTAGGGGTCCTCGTCCGAGACTACATTCCCCTTCAATTTACTAATGGATCTGTGATACACCCTAAGATAGCCTTTGGATGTGGATATGATCAAAAGTATTCTGGTCATACATCCCCACCTTCTACAACGGGAGTCCTTGGCCTTGGCAATGGAAAAACAAGTATTTTGTCCCAGCTTCACTCTCTAGGTCATATTCGCAATGTAGTAGGTCATTGCTTAAGTGGTCGAGGAGGAGGGTTTTTATTCTTTGGAGACGATCTCATTCCCTCATCAGGAATTGTTTGGACACCCATGTTACCTAGTTCTTCAGAAAAACACTACATTTTGGGACCAGCAGAAGTGCTTTTCAATGGAAAGCCTACTACTGTTAAGGGTCTTGAACTTATTTTTGATAGTGGAAGCTCTTACACATACTTCAATTCCAAAGCTTACCGCGCTATTCTTGATCTGGTAACTAATGATATAAAGGGAAAACAATTGACAAGAGCAACTGAGGATCCATCCCTTCCAATTTGCTGGAAGGGTTCAAAGTCTTTCAAATCTGTAAGTGACGCCAAAAGCTATTTCAAGCCCTTAGCATTGAGATTCAAAAAAGTGAAGAATTTGCAGATGCTAATACCGCCAGAAGGCTATCTCATTGTCACTAAACATGGAAATGTTTGCTTCGGGATTCTGGATGGTACTGAAGTAGGACTAGGAAATCTTAACATAATAGGAGACATCTCTTTACAAGATAAAATGGTAATTTACGACAACGAGAGACAGCAGATTGGATGGATTTCTTCCAATTGTGATAGGATTCCAGACATCGACCGTGACTTTGAAGGTGATGCTTTTCAACAGCCGCATGCAGCCAATTTGGGTATCTTTGACAACCGATGCCCTGCAGATTCTGAATTATAA 1341 0.4161 MDCKIKIPFLTLFLFLLFSSIFPLTFSAANKPLNTDKLHRRGSSTVFRVQGNVYPLGYYTVSLKIGNPPKPYDLDIDSGSDLTWVQCDAPCKGCTKPNHQLYKPSNNLVQCVDQLCAGVHLTSDHHCDTPDDQCDYEVEYADHGSSLGVLVRDYIPLQFTNGSVIHPKIAFGCGYDQKYSGHTSPPSTTGVLGLGNGKTSILSQLHSLGHIRNVVGHCLSGRGGGFLFFGDDLIPSSGIVWTPMLPSSSEKHYILGPAEVLFNGKPTTVKGLELIFDSGSSYTYFNSKAYRAILDLVTNDIKGKQLTRATEDPSLPICWKGSKSFKSVSDAKSYFKPLALRFKKVKNLQMLIPPEGYLIVTKHGNVCFGILDGTEVGLGNLNIIGDISLQDKMVIYDNERQQIGWISSNCDRIPDIDRDFEGDAFQQPHAANLGIFDNRCPADSEL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3064 446 ProSiteProfiles Peptidase family A1 domain profile. 59 406 IPR033121 -
Tpr1g3064 446 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 413 - -
Tpr1g3064 446 SUPERFAMILY Acid proteases 51 414 IPR021109 -
Tpr1g3064 446 Gene3D Acid Proteases 232 415 IPR021109 -
Tpr1g3064 446 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 74 85 IPR001969 GO:0004190|GO:0006508
Tpr1g3064 446 PRINTS Pepsin (A1) aspartic protease family signature 65 85 IPR001461 GO:0004190|GO:0006508
Tpr1g3064 446 PRINTS Pepsin (A1) aspartic protease family signature 274 285 IPR001461 GO:0004190|GO:0006508
Tpr1g3064 446 PRINTS Pepsin (A1) aspartic protease family signature 382 397 IPR001461 GO:0004190|GO:0006508
Tpr1g3064 446 Pfam Xylanase inhibitor N-terminal 59 231 IPR032861 -
Tpr1g3064 446 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 274 285 IPR001969 GO:0004190|GO:0006508
Tpr1g3064 446 PANTHER ASPARTYL PROTEASES 7 413 IPR001461 GO:0004190|GO:0006508
Tpr1g3064 446 Pfam Xylanase inhibitor C-terminal 273 405 IPR032799 -
Tpr1g3064 446 Gene3D Acid Proteases 34 231 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3064 Tpr-Chr1 35115564 35119294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3064 21 414 Miscellaneous Gene Families AT1G44130 56.962 5.07e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3064 - - aprc:113846122 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3064 1 35115564 35119294 Tpr1g3064 1 35115564 35119294 ECH