Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3059 ATGCTCTTCTGTGTTGATGTTAATGTTGGTTTGGTAGACACAATGACGGATAAGAAGAGATGGTTATGGAAGCGAAAGTCTTCCGAGAAGAGTTCGGGCGAAGCTGAGAGTTCGGGATCTGTTTCCTCTCATTCTGAGAGGTATTCTGATGAACAGGAAGTATCAAAAGAATCTTCTAATGGAAGCAGTCATTCACCTGATGTCACCTCAAAAGCTGTAGCCTGTGCTGAAGATGTAGACGATAGTTCAGTTATGAACGAACAGCTGCATGATGAAGTTGCACTGACACCTCTTTCTACATGCATCGAAAATGGCATTACATCAGAGATAGATAAAAATGGAGACGATATTTCAGTTATCAATGAACTGCTTCCGGATAGAGTTGCATCGACACCTCTTTCTACATGCATCGAAAATGGTGGTTCATTAGAGGTAGATAAAAATGGAGACAATAGTTCAGTTATCAATGAACAGCTGCCTGATAGAGTTGCATCGACACCTCTTTCTACATGCATAGAAAATGGCGGTTCATTAGAGGTAGATAAAAATGGAGACGATAATTCAGTTATCAATGAACAGCTGCCTGATAGAGTTGCATTGACACCTCTTTCTACATGCATTGTAAATGGAGGTTCACTCGAAGTAGATAAAAATGAAAATATATTGAATGGAAAAGAAGGTGATCGAAATGACGGGTCGAGGGATATATCTGAGAAGCTATCTGCTGCTCCTGTTAATGTCAATGCCAAAGAAGACTTGGTTAAGCAGCATGCAAAAGTTGCTGAAGAAGCCATAGCAGGCTGGGAAAAGGCTGAAAATGAAGTAGCAAATTTAAAGAAGCAACTCGGCACAGTCACCCTCAGGAATTCAGCTCTTGAAGATAGAGTCACGCATCTAGATGGAGCACTTAAGGAGTGCGTTAGGCAGTTAAGACAAACAAGAGAAGAGCACGAAGCAAATATTCAAGATGCCGTAGCCGAAAAGACTCACGAATTGGAATCTGACAAAATTAAACTCGAGAGCAAGCTCATTGAGCTCCAGAACAAATTAGATGCTTCAAATGCCAAATCTTCTATTGAGCGTGATATGCGTCAAAAGGTTGAATGGTTGGAGAAAGAGAAAATGTCTCTCAGGCATGAGATCCTAGTTCAATCAGAAGAGCTGAAAATCAGAACTATTGAGAGGGATTTAAGCACTCAAGCTGCTGAGACAGCTAGTAAGCAACATTTAGAGAGCATCAAGAAAGTTGCCAAGCTTGAGGCCGAGTGTCGGAGACTAAAGAGCATTGCTTCTAGAGCATCGCTAGTTAATGATCATAAATCCATTGCTTCATCCTCATTTTGTGTTGAATCTCTCACAGATAGTCAATCAGATAGTACAGACCGGCTTACTACGGTGGATTGTGATATCCATAAGATGAGTGGTTCAGAGCTAAACAGGTGTGAACCAAGTTGTTCCGACTCATGGGCATCTGCACTGATTGCTGAGCTTGATCAGTTCAAGAATGAAAAGTGCTGCCGACAAGATCCATCCGGTTCTGTTAAAATAGATCTAATGGACGACTTTCTTGAAATGGAACGACTCGCTGCATTGCCTGAGACGAAGAATGAAAGTGTTGTTGAGGAGTCTGTTGTTGCCAATCAATGCATTGACAAAGAAAGCGCACTTAGAGCCGAGTTTGACATCATGAGTCAGCAAATGGATGAACTAAAAATGAAGTTAGAGAAGGTGGAAGCAGATAAAGCTGAACTTGGGATAGCTTTGATGAAAAGCGAAGAGTGTATCGAGGAGTCACGACTTCAGTTGAGTGAGGCAATACTGAAACTGGAGGAGCTTCAAACAGAGCTAGAAATTGCGTACAAATCAAAGCAAAAGTTAGAAAATCGCCTAATGAGCATGGAGGCAGACACTCAAACACTATCTTCCAAGGTCGTTTCGTTAGAAGCAGATGTTGATAAGGAAAGGGCTGTGTCGCACAAATTTGCAATGAAGTGTAAGGACCTTGAAGAAGAGTTAGAAAACAAATCTGCGATGCTTGGCTTATTAGAAGCTGAGGTTGATAAGGAGAGGAGCGTGTTGCATGAAATTGCAATAAAATGCGAGGGCCTTGAGGAAGAGCTAGAAGGAAAATGTGCAAAGGTTGACTTGTTAGAAGCAGAGCTTGTCAAGGAGAGGATTGCGTCACATGAAATTACAGCCAAGTGTAACGACCTTGAGGAAGAGCTAGAAGGCAAATCTGCTAAGGTCAACTTGTTAGAAGCGGAGGTTGTTAAAGAAAGGGCCGTGTCAGATGAAATTGCAGCCAAGTGTAAGGATCTTGAAAAAGAGCTAGAAAGCGAATCTGCAAAGGTTGTCTTATTAGAAGCCGAGGTTGAAAAGGAGAGGGTGATGTCTGAAGAAATTGCATTGAAGTGTCGGGAATTGGAGGAAGAGATACTCAGGCCAACGACTAATTTGTATGGAGAAAAGAAAATCAAGCAGGAGGACCTAGCACTCGCTGCCGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCATCTTTGGGGAATCAGCTAAAGTCTCTGGCTACACTTGAGGATTTCCTTATTGACACTGCTGGAATTCCTCCAAGTCCATCACTCATTGCTCATGCTGGTGGAGAGTTGTGGAAGATGCATTCAAATGTCACATTTTCACCTAAAAGAGATTCTACTTCTTCTAGATTGGCTGATGGTAGCTCTGGTCCATCCCTAAACCAAAATGAGGAAAGCTCGCCACTTTCATCGTCTTCTTCGACTTCATCATCAGCCTTGCCGAATCATGCCAGTTCTGAGAAGAGTCGAAATGGTTTCGCAAAATTTTTCTCGCGAACCAAGAGTGGTATTCGTTTAGAAATTTAG 2877 0.4216 MLFCVDVNVGLVDTMTDKKRWLWKRKSSEKSSGEAESSGSVSSHSERYSDEQEVSKESSNGSSHSPDVTSKAVACAEDVDDSSVMNEQLHDEVALTPLSTCIENGITSEIDKNGDDISVINELLPDRVASTPLSTCIENGGSLEVDKNGDNSSVINEQLPDRVASTPLSTCIENGGSLEVDKNGDDNSVINEQLPDRVALTPLSTCIVNGGSLEVDKNENILNGKEGDRNDGSRDISEKLSAAPVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVANLKKQLGTVTLRNSALEDRVTHLDGALKECVRQLRQTREEHEANIQDAVAEKTHELESDKIKLESKLIELQNKLDASNAKSSIERDMRQKVEWLEKEKMSLRHEILVQSEELKIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKSIASRASLVNDHKSIASSSFCVESLTDSQSDSTDRLTTVDCDIHKMSGSELNRCEPSCSDSWASALIAELDQFKNEKCCRQDPSGSVKIDLMDDFLEMERLAALPETKNESVVEESVVANQCIDKESALRAEFDIMSQQMDELKMKLEKVEADKAELGIALMKSEECIEESRLQLSEAILKLEELQTELEIAYKSKQKLENRLMSMEADTQTLSSKVVSLEADVDKERAVSHKFAMKCKDLEEELENKSAMLGLLEAEVDKERSVLHEIAIKCEGLEEELEGKCAKVDLLEAELVKERIASHEITAKCNDLEEELEGKSAKVNLLEAEVVKERAVSDEIAAKCKDLEKELESESAKVVLLEAEVEKERVMSEEIALKCRELEEEILRPTTNLYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTAGIPPSPSLIAHAGGELWKMHSNVTFSPKRDSTSSRLADGSSGPSLNQNEESSPLSSSSSTSSSALPNHASSEKSRNGFAKFFSRTKSGIRLEI* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3059 958 Coils Coil 728 755 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 620 676 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 706 743 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 779 957 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 17 624 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 744 778 - -
Tpr1g3059 958 Coils Coil 665 685 - -
Tpr1g3059 958 Coils Coil 307 327 - -
Tpr1g3059 958 Coils Coil 329 356 - -
Tpr1g3059 958 Coils Coil 700 720 - -
Tpr1g3059 958 Coils Coil 560 587 - -
Tpr1g3059 958 MobiDBLite consensus disorder prediction 24 71 - -
Tpr1g3059 958 Coils Coil 595 643 - -
Tpr1g3059 958 MobiDBLite consensus disorder prediction 55 69 - -
Tpr1g3059 958 Coils Coil 261 281 - -
Tpr1g3059 958 Pfam Filament-like plant protein, long coiled-coil 751 856 IPR008587 -
Tpr1g3059 958 Pfam Filament-like plant protein, long coiled-coil 250 356 IPR008587 -
Tpr1g3059 958 Pfam Filament-like plant protein, long coiled-coil 354 429 IPR008587 -
Tpr1g3059 958 Pfam Filament-like plant protein, long coiled-coil 482 542 IPR008587 -
Tpr1g3059 958 Coils Coil 360 380 - -
Tpr1g3059 958 MobiDBLite consensus disorder prediction 892 942 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 17 624 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 706 743 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 779 957 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 744 778 - -
Tpr1g3059 958 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 620 676 - -
Tpr1g3059 958 Coils Coil 763 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3059 Tpr-Chr1 35039118 35044467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3059 - - mtr:MTR_1g030010 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3059 1 35039118 35044467 Tpr1g3059 1 35039118 35044467 ECH