Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3047 ATGAAATTGTTCATGTCTCAAATTGAGTTTCTTAGGCACATGACACTTTTCGTGTCTTTCATTGTGCTTATTTTATTATGTAGTAATACTTCCCCAATATTTGCTACAAAGAGTTGTGATTTTCCTGCCATCTTCAACTTTGGTTCTTCAAACGTTGATACTGGTGGATCAGCTGCTGCCTTTGAAGCACTGCCATTGCCATATGGAGAGACTTATTTTAATAGATCAACTGGAAGATATTCTGACGGCAGAATCATTATTGATTTCATTGCACAAAGTTTTGGACTTCCCTATTTGAGTCCATATCTTAATTCTCTTGGGTCCAACTTCACACATGGTGCAAACTTTGCAATAGCAGGATCAACAATTATAAACTCAGATAATATTTTACCTGAAAGAAGGTTTAGTCCATTCTCCTTTATAATTCAATACAAGCAATTTCGAGATTTCATACCCAACACAAAATTCATTAGAGATCAAGGAGGTGTATTTGCAACACTGATGCCCAAAGAAGATTATTTCTCCAAAGCCTTATACACATTTGATATTGGTCAATGTGATCTTGCTGTTGGGTTGGGTAATAATGCGACTATAGAACAAGTCAATGCTACTGTGCCGGATCTAGTAAACGAGTTTATAGAGAATATCAAGAACATATACAACTTAGGGGCAAAAGCATTTTGGATACACAACACAGGACCACATGGATGTCTTCCTATAACTCTGACTAATAATCCATCTGCTATAAAGGACAGATATGGTTGTGCAAAGCAATTCAATGAAATATCTCAGTATTTTAATTTAAAGTTGAAGGAAGCATTAACTCAACTTCGACAAAATCTTCCTCTTGCTGCAATCACATATGTAGATATTTACTCTGCTAAGTATTTACTTTTTCAAAATCCAAAAAAATATGGATTTGAGCTTCCATTTGTGACATGTTGCGGCTATGGAGGGAAGCATAACTGGAATATTAATAATAAATGTGGAGAATTCATAAACATAAATGGTACAAAACATGTTGTGAGTTCATGCAAAAATCCTTCTACAAGAGTGATATGGGATGGGGGTCATTACACAGAGGCAGCTAACAAAGTCATCTTTGATAAAATCTCTACAGGAGCATTCACAGATCCTCCCATTCCCTTAAATATGGCATGTCACCGAAAATTCGAAAAGACGGATACTCCTCGTTCATCGTCAGACAATCACCTTGAAATGACGAGCTTTGTAAACTAA 1239 0.3592 MKLFMSQIEFLRHMTLFVSFIVLILLCSNTSPIFATKSCDFPAIFNFGSSNVDTGGSAAAFEALPLPYGETYFNRSTGRYSDGRIIIDFIAQSFGLPYLSPYLNSLGSNFTHGANFAIAGSTIINSDNILPERRFSPFSFIIQYKQFRDFIPNTKFIRDQGGVFATLMPKEDYFSKALYTFDIGQCDLAVGLGNNATIEQVNATVPDLVNEFIENIKNIYNLGAKAFWIHNTGPHGCLPITLTNNPSAIKDRYGCAKQFNEISQYFNLKLKEALTQLRQNLPLAAITYVDIYSAKYLLFQNPKKYGFELPFVTCCGYGGKHNWNINNKCGEFININGTKHVVSSCKNPSTRVIWDGGHYTEAANKVIFDKISTGAFTDPPIPLNMACHRKFEKTDTPRSSSDNHLEMTSFVN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3047 412 CDD SGNH_plant_lipase_like 42 374 IPR035669 -
Tpr1g3047 412 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 14 391 - -
Tpr1g3047 412 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 14 391 - -
Tpr1g3047 412 Pfam GDSL-like Lipase/Acylhydrolase 44 371 IPR001087 GO:0016788
Tpr1g3047 412 MobiDBLite consensus disorder prediction 393 412 - -
Tpr1g3047 412 Gene3D SGNH hydrolase 33 374 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3047 Tpr-Chr1 34915342 34919994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3047 42 385 Acyl Lipid Metabolism Gene Families AT4G10950 28.212 1.83e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3047 - - cam:101514585 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3047 1 34915342 34919994 Tpr1g3047 1 34915342 34919994 ECH