Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3046 ATGAAATTGTTCATGTCTCAAATTGAGTTTCTTAGGCACATGACACTTGTGTCTTTCATTGTGCTTATTTTATTATGTAGTAATACTTCCCCAATATTTGCTTCAAAGAGTTGTGATTTTCCAGCCATATTCAATTTTGGTGCTTCAAACTCTGATACTGGTGGATTGGCTGCTGCCTTCGAAGCACTACCGTTTCCATTTGGAGAGACTTATTTTCATAGATCAACTGGAAGATATTCTGATGGTAGAATCATTCTTGATTTCATAGCACAAAGTTTTGGACTTCCGTATCTCCATCCATATCTCAATTCTCTTGGGTCCAACTTTACATATGGTGCAAATTTTGCAACAGCGGGGTCAACAATCAGAATCCCGAATAGTATTTTACCTCGAGGAATGTTTAGTCCATTCGCCCTTATAGTTCAGTATAGACAATTCAGAGATTTCATACGCAACACAAAATTCATTAGAGATCAAGGAGGTGTATTTGCAACATTGATCCCCAAAGAAGATTATTTTTCCAAAGCCTTATACACATTTGATATTGGTCAAAATGATTTTGTTGCTGGGTTGAGTAATAATGAGACTATACAACAAGTGAATGCTACTGTACCTGATATAGTAAACACTTTCATAGAGAATATCAAGAGCATATACAACTTAGGTGCCAGATCATTTTGGATACACAACACAGGACCAAATGGATGCCTTCCTGTAACTTTGGCGAATTTTCCTTCCAAAATAAAGGATAGATATGGTTGTGCAAAGCAATTCAATGAAGTATCTCAGTATTTCAATTTAAAGTTGAAGGAAGGATTAGCTCAACTTCGAAAAGATCTTCCTCTTGCTGCAATCACATACGTTGATATTTACACTCCTAAGTATTTACTTTTTCAAAATCCAAAAAAATATGGATTTGAGCATCCACTTGTGGCATGTTGCGGCTATGGAGGGAAGTACAACAATAACGTTAGGAATAAATGTGGAGAATCCATAAACATAAACGGTACCAAACATCTCGTGGGTTCATGTAAAAATCCATCTAAAAGAGTGGTATGGGATGGAACTCATTACACAGAGGCAGCTAACAAATTCGTCTTTGATCAAATTTCTACCGGAGCATTCACAGATCCTCCCATTCCACTAAATATGGCATGTCACCGAAAATTCCCTTGA 1176 0.3673 MKLFMSQIEFLRHMTLVSFIVLILLCSNTSPIFASKSCDFPAIFNFGASNSDTGGLAAAFEALPFPFGETYFHRSTGRYSDGRIILDFIAQSFGLPYLHPYLNSLGSNFTYGANFATAGSTIRIPNSILPRGMFSPFALIVQYRQFRDFIRNTKFIRDQGGVFATLIPKEDYFSKALYTFDIGQNDFVAGLSNNETIQQVNATVPDIVNTFIENIKSIYNLGARSFWIHNTGPNGCLPVTLANFPSKIKDRYGCAKQFNEVSQYFNLKLKEGLAQLRKDLPLAAITYVDIYTPKYLLFQNPKKYGFEHPLVACCGYGGKYNNNVRNKCGESININGTKHLVGSCKNPSKRVVWDGTHYTEAANKFVFDQISTGAFTDPPIPLNMACHRKFP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3046 391 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 389 - -
Tpr1g3046 391 CDD SGNH_plant_lipase_like 41 373 IPR035669 -
Tpr1g3046 391 Pfam GDSL-like Lipase/Acylhydrolase 43 370 IPR001087 GO:0016788
Tpr1g3046 391 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 389 - -
Tpr1g3046 391 Gene3D SGNH hydrolase 32 373 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3046 Tpr-Chr1 34898927 34908566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3046 41 384 Acyl Lipid Metabolism Gene Families AT4G10950 27.606 5.04e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3046 - - cam:101514585 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3046 1 34898927 34908566 Tpr1g3046 1 34898927 34908566 ECH