Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3045 ATGAATCCCTACATTTTCAGCGTCATTCTCCCCATTCTCGCCACACTCATCTTCCGAACTAACCATCCCAAACGCCGCGGAATTCCCGTCACTGACGGAAGCGGCGATCCCGGAGTCACAATTCGTAACAGACGATTCGATTCACCGGTGGAAACAGCATGGGAAGGAGTAAGCACTTTAGTGGAGCTATTCGAAGAAGCTTGCAGGAAACATGGTGAGAGATTATTGCTTGGAACGCGTTTGATTATATCGAAAGAAACGGAAACGAGTAGTGATGGTAGAAGATTCGAGAAAGTTGAATATGGAAATTATGAGTGGTTATCGTATGCTAATGCTTTTGAAGATGTTTTGAGATTTGGTAGTGGATTGGCTGCATTGGGACATGAGAGGAATGAACGTGCTGCTATCTTTGCTGATACTAGGGAAGAGTGGTTCCTTGCTCTGCAGGGTTGTTTCAGGCGAAATGTAACAGTTGTAACTATGTACGCATCGTTGGGAGAGGAAGCTATATGTCACTCACTGAATGAGACAGAGGTTACGACAGTAATTTGTGGGAAGAAAGAATTGAAAACACTTGTAAATATTAGTGGACAAATCGACTCAGTGAAACGTGTGATATGCATGGATGATGATATCCCATCTGATGCCTCATCTGTTGGACATGGCTGGACAATTATATCCTTTGCTGATGTTAAGAGACTTGGTAAAGAAAATCCTGTTGATGCTGATTTACCTCTCCCAGCAGATGTTGCAGTTATAATGTATACAAGTGGAAGTACCGGATTACCTAAGGGTGTGATGATGACACATGGTAATGTTTTAGCTACACTCTCTGCTGTGATGACAATTGTTCCCAAACTTGGGAAAAAGGATGTATATCTAGCATACTTGCCACTGGCTCATATCCTTGAACTAGCCGCTGAGAATTTGATGGCAGCTGTTGGGATTGCTATAGGATACGGATCTCCTTTGACTCTAACAGATACATCAAGCAAGATAAAGAAAGGAACAAAGGGGGATGCTACTGTGTTGATGCCAACTTTATTGGCTGCTGTACCTGCAATTCTTGACCGCGTTCGTGATGGAGTGTTTAAGAAGGTAAATGCAGCAGGAGGATTATCAAAGAAGTTATTTTATTTAGCCTATGAGAGGAGGTTGCAAGCAATTAATGGGAGCTGGTTTGGAGCTTGGGGCTTGGAAAAGGCCCTCTGGAATTTTCTTGTGTTCAGTAAAGTCCGAGCAATTCTAGGTGGTCGTATCCGTTTTATACTGTCTGGTGGTGCTCCCCTTTCTGGTGATACTCAGCAATTCATCAACATATGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCGGATTTTGATGATACATCTGTTGGCCGTGTTGGACCACCTCTTCCTTGCTCATTTGTTAAGTTAATCGACTGGTCTGAAGGTGGATATTTAACTAATGACTCACCAATGCCTCGTGGTGAAATTGTAATCGGTGGTCCAAATGTTACTCTTGGGTACTTCAAGAATGAAGAAAAGACAAACGAATCATACAAGGTTGATGAAAAAGGAATGAGATGGTTCTACACTGGTGACATAGGGAGGTTTCATACAGATGGTTGCCTTGAGATCATCGATCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAGTATGTCTCACTGGGAAAGGTTGAGGCAGCTCTTATTGTCAGCCCCTATGTGGACAATATAATGTTGCATGCTGATCCTTTCCATAGTTACTGTGTGGCACTTGTTGTGACTTCTCAGTCCACATTGGAAGAATGGGCTTCAAAGCAAGAAATTCCTTATTCTAGTTTTTCAGAACTCTGCTCTAAAGAAGAAAGCGTGAAAGAGGTGCATGCGTCACTAGTAAAGGAAGCAAAGAAAGCTCGTTTGGAGAAATTTGAGATTCCAGCAAAAATAAAATTGCTTTCTGATCCCTGGACACCTGAGTCTGGCCTAGTCACTGCTGCTCTCAAGATCAAGAGAGAGGTCATCAAGAAAACTTTCCAGGAAGAACTTGTGAAGTTATACTCTTCATAG 2088 0.4267 MNPYIFSVILPILATLIFRTNHPKRRGIPVTDGSGDPGVTIRNRRFDSPVETAWEGVSTLVELFEEACRKHGERLLLGTRLIISKETETSSDGRRFEKVEYGNYEWLSYANAFEDVLRFGSGLAALGHERNERAAIFADTREEWFLALQGCFRRNVTVVTMYASLGEEAICHSLNETEVTTVICGKKELKTLVNISGQIDSVKRVICMDDDIPSDASSVGHGWTIISFADVKRLGKENPVDADLPLPADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPKLGKKDVYLAYLPLAHILELAAENLMAAVGIAIGYGSPLTLTDTSSKIKKGTKGDATVLMPTLLAAVPAILDRVRDGVFKKVNAAGGLSKKLFYLAYERRLQAINGSWFGAWGLEKALWNFLVFSKVRAILGGRIRFILSGGAPLSGDTQQFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSFVKLIDWSEGGYLTNDSPMPRGEIVIGGPNVTLGYFKNEEKTNESYKVDEKGMRWFYTGDIGRFHTDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVDNIMLHADPFHSYCVALVVTSQSTLEEWASKQEIPYSSFSELCSKEESVKEVHASLVKEAKKARLEKFEIPAKIKLLSDPWTPESGLVTAALKIKREVIKKTFQEELVKLYSS* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3045 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 694 - -
Tpr1g3045 695 Pfam AMP-binding enzyme 101 562 IPR000873 -
Tpr1g3045 695 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
Tpr1g3045 695 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 13 694 - -
Tpr1g3045 695 SUPERFAMILY Acetyl-CoA synthetase-like 56 693 - -
Tpr1g3045 695 Gene3D - 49 554 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3045 Tpr-Chr1 34891025 34898982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3045 148 694 Acyl Lipid Metabolism Gene Families AT1G77590 79.525 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3045 K01897 - gmx:100803677 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3045 1 34891025 34898982 Tpr1g3045 1 34891025 34898982 ECH