Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3043 ATGGAAGAAGGCCTAGTTTGCCAGTGGAGCGTCTTTAGATCTCTTTTGGCAATTCTTCAATGGTGGGCTTTCAATGTCACTGTCATTATTATGAACAAGTGGATCTTTCAGAAATTGGATTTCAAGTTTCCCCTATCGGTATCCTGTATCCACTTTATCTGCTCAGCCATTGGAGCATACATGGTAATTAAAGTGCTGAAGCTTAAACCACTCATAGCTGTTGACCCTCAAGATCGCTGGAAAAGAATATTTCCTATGTCATTTGTGTTCTGTATTAACATAGTTTTGGGGAATGTGAGCCTGCGCTACATACCAGTTTCTTTTATGCAAACAATAAAATCATTCACTCCTGCAACAACAGTTGTTTTGCAGTGGCTAGTATGGAGAAAATATTTTGACTGGCGCATTTGGGCTTCTCTCATACCCATTGTTGGAGGGATTCTTTTGACATCTATTACAGAGCTAAGTTTTAATATGTTCGGATTTTGTGCTGCCTTATTTGGCTGTTTGGCTACTTCTACAAAGACTATCCTTGCAGAGGCTTTATTGCATGGTTACAAATTTGACAGCATAAATACAGTTTATTACATGGCACCTTTTGCAACCTTGATCATGGTATTACCTGCTTTCTTACTTGAAGGCAATGGAATTCTTGAGTGGTTCAGTGTTCATCCATATCCTTGGGCGGCCATGATCATTATTTTCAGCTCCGGTGTTTTGGCATTCTGCCTTAATTTCTCTATTTTTTACGTGATTCACTCCACCACAGCTGTTACATTTAATGTTGCTGGAAACCTTAAGGTTGCGGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAATCCAATTTCATATATGAATGCGGTTGGATGTGCCATAACTCTTGTTGGATGTACATTCTATGGTTATGTTAGGCACATGCTCTCCCAACAACCACCAGTTCCAGGAACTCCTCGGACACCAAGGACGCCTAGGAGTAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGATGATAAGGTCTAA 1029 0.4004 MEEGLVCQWSVFRSLLAILQWWAFNVTVIIMNKWIFQKLDFKFPLSVSCIHFICSAIGAYMVIKVLKLKPLIAVDPQDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSITELSFNMFGFCAALFGCLATSTKTILAEALLHGYKFDSINTVYYMAPFATLIMVLPAFLLEGNGILEWFSVHPYPWAAMIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYMNAVGCAITLVGCTFYGYVRHMLSQQPPVPGTPRTPRTPRSKMELLPLVNDKLDDKV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3043 342 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Tpr1g3043 342 Gene3D - 45 158 - -
Tpr1g3043 342 PANTHER GDP-MANNOSE TRANSPORTER GONST5 1 327 - -
Tpr1g3043 342 PANTHER SOLUTE CARRIER FAMILY 35 1 327 - -
Tpr1g3043 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 65 152 - -
Tpr1g3043 342 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3043 Tpr-Chr1 34869263 34874949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3043 1 342 Organic Solute Cotransporters AT1G77610 89.213 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3043 K15285 - gmx:100817042 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3043 1 34869263 34874949 Tpr1g3043 1 34869263 34874949 ECH