Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3041 ATGAAGAACCCCATCGATCTCGGCACACCGAATCCCCAATCAGTAGGTAAACAACAACAACAGCTTCAAGGATCTTCTACGCCTGAAAAAACAAACAAGAAGAGAAAATCCCCTGCAAAATTCACTCCTAGAAAAAAAAGCTCTAAGAACAACACGCCGAAGAAAAACGCTTCGGTTAATGGAGTTAATGGGACTGCTTCACCTGATGTGGCTTGGAAAATTGATTTGCGGGGTGAGGCGAAATTGTCAGCTGAGGAAAATTCACGGTTGTCTGCGGGACTACCATTACATCCGCTCTTTTTAACGTGTAAAGGGGAGAAGAAAAGTCGGGAGTCTGCTGATTCGGAATGCATTTTGTCTGATGCTAAGAAGAAGAATGGAAGAACTATTTGCCCTCCTATTCATGTATTTGAAGATAGTCAGGATGATACTTCATCAGTTGACTGGAGTGACTGGAAATTTTTAGGAAATACCACCGTTGTGGATTGTGGTCCAGAAAGTTCAAATTTATCTGTTATGGAGGGTTCTATTGAATCCTTAAATTTTGATAACTTTCTTAGTGGTGTAAAACCCTCAAGCACTTCAATTTCTCAGAATGCCTTGTCTTGTTCAGATAAACTATCTACACAATCAGAAAATATGATGGAAATGTCACCAGAAAACTCAACTGTGCTAGCTAATGAACAGGCAAAATGCACTTCAAAGCTGGAAGATGCCATAGTGGACTTGGAGCTGGATGAAGTCAGTACTGTATCCAGGAGAGCATGCATTAACGGAAAATCAGATAAGGCTGACAGTAGCTTATGGATACACAAGTACAAGCCAACAAAAGCTTCAGAGGTATGCGGTAATGATGAATCCATGAATTTCTTGCGTGGCTGGTTAAATCTTTGGCGTGAAAGACGTTATCAAAACAGAAAGGATTCCTCTAACAAGGATCAAATTGACATGCCAAATGATGATGGTGATTATAACTGTCCTGATTGTGACTATGATTCAAAAGATGTTGACGAGGAGGGTTCCCTGAAGAATGTTCTTTTAATTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTTTATGCTTGTGCCCGGGAGCAAGGGTTTGACGTTTTAGAGCTCAATACATCAGACTCTCGAAATGGGGTTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACATGGTGTCAAAAGGTTAGTGGAACACACTGTGAGTTCACAGAAGAAAACTGTGAAACTGCTCCCAGCCCCGGCTTCACCTAATGTTAAAGCAGCTGATGAGAAGGATGATGATGTCATTGAAATGATAACCATATCTGATGATGGAGCGCATAGTCCTGGTGGAACATCTCAGAAGTTATATGACACAAATAATGCGCTTACATATGATTCTATGCAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCCGAAGATCGTGGATGTATTGCTGCCATACAACACATTGCTGAGACAGCAAAAGGACCAATTATACTGACCAGCAACAGTAAAAATGCTGGCCTGCCAATTAATTTGTGTAGACTACATGTTTCTTTCTCATTGCCATTGCCGGATGAGTTGCTTTGCCATTTGTTCACGGTATGTGCTTTAAGCTCTCCAACTTGTAAAAAAGACGGGAAAATGAAAAGATTGAAAGTGAAATTTAACTCTTCGGTGGATGACCTGCAGGTTTGTGTCGCAGAAGAAGTCAACATCAATCCTCTTTTATTAGAGAAGTTTATCCAGTCTTGTGATAGGGATATTCGTAAAGCCATTATGCATATTCAGTTCTGGTTCCAGAAGAAAAAACATGGCAAAGACAAGAAAGTGCAGACAGTATATGGCTCACTACCTTTTGATCTTGAGGCTGGTCATAAGATACTACCAAAGATAATACCCTGGAGTTTTCCCTCAGAGTTATCCGAACTAATCGAGAAGGAAGTTGCCAAGTCAATAACCATAACGGAAAACAACTCAAACTGGGAAGGGTTAGCTAATGAAGAGCTTTGCATAAATGACAAGCAAAATAACTTAGATGTGCAGTGTATGGAAACTGATTATTTAGAGCCCAAAGTAGAGGTCTCAAAGAGGATTGCACCTATTACAGACTGCGGTGAGTTTGAAAGTCAATATAGTGCTATCTCTGAGCTTTGTAATTGTTCTGGATCCTCAGTAACATCCTCTTGGCAAAACGACCAAAATAACCTTGTAGTGATGTCCTCGGATGCTATGAATAAGGATCCATATAGTAGACATTCTGTAGATGTTCATGACGAAGCTTACAAGAAACAATGCCTTGAAGGCAACCGTGAATCTTCCTTTGCATTTCTATTGAATCAAAGCTATGCCAGTATGTCATTTTGCGAGCTGCTGCGTTCTGGTTTGGAAAATTCAGAGGAGGAACAGTGTAAATATTTAGAAACAACGTATGATGCCTGCTTAAACAAAACACCTAAATCACTTGATATGTCTTGTTTTCCAGAATCAAGACTTGTTTCCGAGACTGCAATTCAAAATAGAATAGAAACAAAGTCTGGAGTAGTGTCATATGGTGACCATCTTGCTTGTCCGATAGATGCTTCTCTGGGTAATGAGATGACACCATTCTCTTTTGGTGTTTGTCAGCGCTTGGCCAAAGTGCCTCAAGATCGAGATTTGTTGGTGAATACTGAAATTCCCAAATCTTCTCCAAGAACAACAGCACATGATTTGATTGATGAGAACATGGAAATCCCAACTGTGTATAACACGTTGGATGAGTGCAGTCAAACTGATGTCAAGCTGAAGTCAAATTTTGTTGATTCTAGTCAATCTATGGAGATAGATTTGGTGCAAAGTTTTTGGACGAAACTTCGGGATTGTCGAACAGATTTAAAACAGCATGCTGCCTCAGAACAGATAGGTGCTATAGAGGTTGTTAAACTTGCTAGTGGACTAAGCAATCTAATTTCAGAAGCTGATTTGTTGTTTTGTAATCACCAGCAAAAACAATGTGGTATTATGGAGCCTCCAACTTTCCTGTCTGATGAATCCACATTTAGTTGGTATGATGAACAAATGATGATGTCAAATGTTGCTGTACATGGATTTTGCTTTTATGCCAAGCATATAGTAGATGTCGGATCCAAATTGGGTTTTGCGAACAGGGTCGACATAACTTCAGAGATGTTGGCTTCTACTGCAAACATTATGGCTCTGGGGAAGTTATCAAGACAGGAACACACCAAACCCATGAGTAACTTTAGCAAAGAGCTTTTAGAGGTGAACAACCCAAGGAATGATAAGAAGAGCATGCAATATGAAGAAAGAAGAACATCTCTGTTCAACGTGATCAGATCCATTGTTCCTGCAAAATCATCAACAACGGCAATTAAAGGCATTGCATTTAGTGAATATCTTTCTTCACTGCGCCAAATTTCAATTTCAGAGGATTTCCGCATTTCACAAGGTGTTAAAAAGATGAGGAAAGGAAGGCGGAATGCTGAACATTATTTGAGCAGAGGTAAAATGGTGTTGTCTCCTGAAGATATATCATCGGTGTGTGAAGGTGACTTGTATAGAAAGATATCTTCACAGTATGCTGCTAACATGGAAAGCAACTGCACAGGATTAAACATTGTAGCTCATATTTAA 3645 0.4 MKNPIDLGTPNPQSVGKQQQQLQGSSTPEKTNKKRKSPAKFTPRKKSSKNNTPKKNASVNGVNGTASPDVAWKIDLRGEAKLSAEENSRLSAGLPLHPLFLTCKGEKKSRESADSECILSDAKKKNGRTICPPIHVFEDSQDDTSSVDWSDWKFLGNTTVVDCGPESSNLSVMEGSIESLNFDNFLSGVKPSSTSISQNALSCSDKLSTQSENMMEMSPENSTVLANEQAKCTSKLEDAIVDLELDEVSTVSRRACINGKSDKADSSLWIHKYKPTKASEVCGNDESMNFLRGWLNLWRERRYQNRKDSSNKDQIDMPNDDGDYNCPDCDYDSKDVDEEGSLKNVLLITGPVGSGKSAAVYACAREQGFDVLELNTSDSRNGVAVKQYFGDALGSHGVKRLVEHTVSSQKKTVKLLPAPASPNVKAADEKDDDVIEMITISDDGAHSPGGTSQKLYDTNNALTYDSMQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSKNAGLPINLCRLHVSFSLPLPDELLCHLFTVCALSSPTCKKDGKMKRLKVKFNSSVDDLQVCVAEEVNINPLLLEKFIQSCDRDIRKAIMHIQFWFQKKKHGKDKKVQTVYGSLPFDLEAGHKILPKIIPWSFPSELSELIEKEVAKSITITENNSNWEGLANEELCINDKQNNLDVQCMETDYLEPKVEVSKRIAPITDCGEFESQYSAISELCNCSGSSVTSSWQNDQNNLVVMSSDAMNKDPYSRHSVDVHDEAYKKQCLEGNRESSFAFLLNQSYASMSFCELLRSGLENSEEEQCKYLETTYDACLNKTPKSLDMSCFPESRLVSETAIQNRIETKSGVVSYGDHLACPIDASLGNEMTPFSFGVCQRLAKVPQDRDLLVNTEIPKSSPRTTAHDLIDENMEIPTVYNTLDECSQTDVKLKSNFVDSSQSMEIDLVQSFWTKLRDCRTDLKQHAASEQIGAIEVVKLASGLSNLISEADLLFCNHQQKQCGIMEPPTFLSDESTFSWYDEQMMMSNVAVHGFCFYAKHIVDVGSKLGFANRVDITSEMLASTANIMALGKLSRQEHTKPMSNFSKELLEVNNPRNDKKSMQYEERRTSLFNVIRSIVPAKSSTTAIKGIAFSEYLSSLRQISISEDFRISQGVKKMRKGRRNAEHYLSRGKMVLSPEDISSVCEGDLYRKISSQYAANMESNCTGLNIVAHI* 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3041 1214 MobiDBLite consensus disorder prediction 37 51 - -
Tpr1g3041 1214 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 1 540 IPR004582 GO:0006281
Tpr1g3041 1214 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 567 1202 IPR004582 GO:0006281
Tpr1g3041 1214 MobiDBLite consensus disorder prediction 1 64 - -
Tpr1g3041 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 614 IPR027417 -
Tpr1g3041 1214 Gene3D - 566 619 - -
Tpr1g3041 1214 MobiDBLite consensus disorder prediction 1 28 - -
Tpr1g3041 1214 Gene3D - 266 523 IPR027417 -
Tpr1g3041 1214 CDD AAA 334 390 - -
Tpr1g3041 1214 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 567 1202 - -
Tpr1g3041 1214 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 1 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3041 Tpr-Chr1 34838875 34846698 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3041 - - gmx:100815984 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3041 1 34838875 34846698 Tpr1g3041 1 34838875 34846698 ECH