Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3040 ATGCGAACTCACCACGCCGTAGAGGTTGCAAAAACGGTGCTCGAAGTCGCCGACGTCGCTTGGACCGCCGTCGAATGCGGCCACCATCTCCGTCACCATGATCACACCGTCACACCCAATGATAACGATAATTACCCTTCCGACCATGACTTAGAGTCTCTCCAATCGGAAAATCGACGCCTCAGGAATTTGCTTGATCAGAATCTTAAGCTTCTATATAATCTCTCCGAATCAAATTCATTCATCAACAATTGTCCTCCCGATTTGCATGTGCGATTAGCTGCTACTGTGAGGTCTGATGAGTACTTGACTCGGCTCAAGTGTATACAGCAGGAAACTGCTAATGGAGGAAATCAATTTCCGTTTAAGGAGGCTACTGAGGTTGATTATCAATCCGCTGATATTTTAATCAACGTGGACTCTCAAGAACCCAGTTGGTGGGTTTGGGTTGCTGATGAGACGGATCCTATTAATTATGAGGAATCCAGTGGAATTGATGATGAGAGTTATTTGATCATCAGCGAAGAACATGTGGTTGATGGAGTTGCCAACTTTATGGCACGATGCATTATGTCAAACCCAAAAGCCCTGAAGTTGTCACCAGAGGAACTACAACAAAATCTATCAAAAGCTTTTGCTGGTACAAGCAAACTGGAAAGGGTTTTAGATATTTGGAATGCTGGAAAGTTGTTTTATGCGTTATCTACCTGGGGACTTGCTTTGGCAGGGCTGTACCAAAGCCGGTCATTGATAAAAGTTGCGGCCAAGGGTGTTCATTCGGGCGGTAAACTCGCTCTCAAGATGAGGGCTCTAAGGATGGCTGCTCCATGA 831 0.4549 MRTHHAVEVAKTVLEVADVAWTAVECGHHLRHHDHTVTPNDNDNYPSDHDLESLQSENRRLRNLLDQNLKLLYNLSESNSFINNCPPDLHVRLAATVRSDEYLTRLKCIQQETANGGNQFPFKEATEVDYQSADILINVDSQEPSWWVWVADETDPINYEESSGIDDESYLIISEEHVVDGVANFMARCIMSNPKALKLSPEELQQNLSKAFAGTSKLERVLDIWNAGKLFYALSTWGLALAGLYQSRSLIKVAAKGVHSGGKLALKMRALRMAAP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3040 276 PANTHER RING FINGER PROTEIN 1 267 - -
Tpr1g3040 276 Coils Coil 51 71 - -
Tpr1g3040 276 PANTHER EXPRESSED PROTEIN 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3040 Tpr-Chr1 34834644 34837687 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3040 - - mtr:MTR_1g030420 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3040 1 34834644 34837687 Tpr1g3040 1 34834644 34837687 ECH