Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3000 ATGATGTTGAGCAAGCAGAAGAAGAATCAGAATGCGAATCACAACCAGAGGAGGTTGTTGATTAGCATCAATGTGTTGGGAAGTGCTGGACCGATTCGATTTGTTGTGAATGAAGAAGAGCTTGTTGAAGCTGTTATTGATACTACTCTTAAGTCTTATGCTCGTGAAGGTCGATTACCTCTTCTGGGGAGTGATAACAGTGCTTTCTTTCTCTACTGTCCTCATCTTGGATCTGATGCCGCTCTGAGTCCATGGGATAAAATCGGATCACATGGAGCTCGGAATTTTGTGCTATGCAAGAAGCCACACACCACAAATGAGGCAGCTGATGATGGAAGTGGGAATTCTTCAAATGGGACTACAACAATTTCCCGCAGGGGAAGTAGTGGTAGTTGGAAATCTTGGTTCAACCTCAACCTTAAAATTTCTTCCCATTGA 438 0.4338 MMLSKQKKNQNANHNQRRLLISINVLGSAGPIRFVVNEEELVEAVIDTTLKSYAREGRLPLLGSDNSAFFLYCPHLGSDAALSPWDKIGSHGARNFVLCKKPHTTNEAADDGSGNSSNGTTTISRRGSSGSWKSWFNLNLKISSH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3000 145 PANTHER BNAC05G50380D PROTEIN 3 140 IPR040358 -
Tpr1g3000 145 PANTHER BNAC05G50380D PROTEIN 3 140 - -
Tpr1g3000 145 MobiDBLite consensus disorder prediction 108 129 - -
Tpr1g3000 145 MobiDBLite consensus disorder prediction 105 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3000 Tpr-Chr1 34422342 34424051 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3000 - - mtr:MTR_1g031680 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3000 1 34422342 34424051 Tpr1g3000 1 34422342 34424051 ECH