Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2988 ATGGAAGAAGCAGAAAAAGAGTTAGAGAGAAGGAGCAAGTTTCTAAACAGTTTGATACAGAACAAGAAAAAATCCATAAAACAACCACAACAACAAGAACAAGAGAAAGAACAAGAGCAAGAACAGCATGATAATAATATTAAACTCAACAACATTCATGTCAGAGCTTGTGACATGTCTCTTGCTTTGCAGAAACATGCTTTCCAATGTGCACGTGACCATCTTGATTCTATGCCATCTAAGAAGGTTGACAGTAAACACTTGGCACTGGTCCTTAAGAAGGAATTTGATTCTTCTTATGGACCAGCTTGGCACTGCATTGTGGGCACTAGTTTTGGTTCCTATGTTACACACTCTCTTGGTGGTTTTTTGTACTTTTCCATTGATAAGGTTCATGTCCTTCTCTTCAAGACAGTTGTTGCACCACTGGATCATTGA 438 0.3858 MEEAEKELERRSKFLNSLIQNKKKSIKQPQQQEQEKEQEQEQHDNNIKLNNIHVRACDMSLALQKHAFQCARDHLDSMPSKKVDSKHLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVHVLLFKTVVAPLDH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2988 145 PANTHER DYNEIN LIGHT CHAIN 1 144 IPR001372 GO:0007017|GO:0030286
Tpr1g2988 145 PANTHER DYNEIN LIGHT CHAIN 1 144 - -
Tpr1g2988 145 Coils Coil 1 21 - -
Tpr1g2988 145 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 38 139 IPR037177 GO:0007017|GO:0030286
Tpr1g2988 145 SMART Dynein_light_2 47 138 IPR001372 GO:0007017|GO:0030286
Tpr1g2988 145 MobiDBLite consensus disorder prediction 28 47 - -
Tpr1g2988 145 Pfam Dynein light chain type 1 52 138 IPR001372 GO:0007017|GO:0030286
Tpr1g2988 145 SUPERFAMILY DLC 46 138 IPR037177 GO:0007017|GO:0030286
Tpr1g2988 145 MobiDBLite consensus disorder prediction 19 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2988 Tpr-Chr1 34336968 34339596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2988 K10418 - gmx:100805980 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2988 1 34336968 34339596 Tpr1g2988 1 34336968 34339596 ECH