Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2983 ATGGCAACCTCATCATCTTCTATAACACACAATAAAGAAGAGAAACAAATTGAACATGATCAAAATGTTCTGCAAAAACATGTTGCATTCTTCGATAGGAACCATGATGGCATCGTTTATCCATGGGAAACATTCCAAGGGTTTCGGGCAATAGGTTGTGGAATCGTGTTATCGAGTGTTGCTGCTATTTTCATAAATCTCGGTCTTAGCCAGAAAACTCGTCCGGGAAAATTTCCTTCTATAAAACTACCAATAGAAATTAAAAACATCAACAAAGCAAAACATGGAAGTGACTCTGGTGTCTATGATAGCGAAGGAAGGTTTGTTCCTTCAAAATTTGAAGAAATTTTCAACAAGCATGCAAAAAAAAACTCAAATGCTTTAACATCTGATGAATTGATCGGGCTGCTAAAGGCAAATAGAGAGCCTAAGGATTACAAAGGATGGCTTGCTAGCTACACAGAATGGAAGATCTTATATGTTCTTTGCAAAGATAAGAAAGGTTTACTTCACAAAGAAACCATTCGTGCTGTCTATGATGGGAGCCTATTTGAACGTATGGAAAAGGAACACTCAGAAAAGAAAAATAAATAA 594 0.3636 MATSSSSITHNKEEKQIEHDQNVLQKHVAFFDRNHDGIVYPWETFQGFRAIGCGIVLSSVAAIFINLGLSQKTRPGKFPSIKLPIEIKNINKAKHGSDSGVYDSEGRFVPSKFEEIFNKHAKKNSNALTSDELIGLLKANREPKDYKGWLASYTEWKILYVLCKDKKGLLHKETIRAVYDGSLFERMEKEHSEKKNK* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2983 197 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 6 196 - -
Tpr1g2983 197 PANTHER PEROXYGENASE 3-RELATED 6 196 IPR007736 -
Tpr1g2983 197 Pfam Caleosin related protein 20 187 IPR007736 -
Tpr1g2983 197 SUPERFAMILY EF-hand 19 175 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2983 Tpr-Chr1 34257226 34266615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2983 15 197 Acyl Lipid Metabolism Gene Families AT1G70670 69.945 6.39e-94 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2983 K17991 - gmx:100306686 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2983 1 34257226 34266615 Tpr1g2983 1 34257226 34266615 ECH