Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2875 ATGGCGGAATGCGAAATCCAGAAGATAGATCCAGAAACAGAATTTCTATCATCAAAGAGAGAAACCGGAAACGAATGGGAAATCTTCAAAGAAAACGTTAGACCATTGAAAAGAGGTCGTAACGTTAACATCCTCAACAACGCTCTCAAATCTCACACCGATAATCACCTCAAGAAATCGCTTCTGAATCAACGAAGGAAACTTATTGAAGCGGTTGATGATTACAAAGGCGAAGATCCTCTTCTCCCTTGGTTAGAGTGTATGAAGTGGGTTCAAGAAGCGTTTCCTCCAGGTGGAGATAGCTCAGGGTTGGTGGTGATTTATGAACAATGTGTGCGTGCATTTTGGCATTCGGAACAGTATAAGGATGATTTGCGGTATCTCAAAGTGTGGCTTGAATATGCAGACAATTGCTTTGATAAGGAAGTTATATATGCTTTTTTGGATGCAAATGAAATTGGAAAAACTCATTCTGATTTCTACATTTCATATGCTTTGCACTTGGAAGTTAAGAACAAGTTTAAAGCTGCTAATCAGACATTTGAACTTGGCATATCAAGGAATGCTCAACCCATTGAAAAATTGAAGGCTGCTTACAGAAAATTTCTCATTCGCTCAATGTCAAGGACAAAACCTGTAGAGGAACCAATGGAAAAACAGGCACCTGTCCGTAGCTTTGGAACTCTTCTCGCAAAAGGAGAAAATGGTGCCCGGTTGGCTTCTTTGAAAAGTGATCATTCTTCTAAGAACAATAGGACTCGAGCAGCACCACTTTCCATTTATAAAGATTCAAATGCCAGTGGTGAGACTGGCCCACATCAGCCAGACCAGTCAAACTCTTGGCTCAAACTTGGAGCTCGAGCTGAAAGAAACAAGGAAAACAATGCAATTCCTGCCAAATGGAAATCCTTTAAGATTCCACAGCGACCTGGGACCAGAACTTCCGTGGCTAGTGCAAGTGCCTGTATCCCGGTGTTTGTTGATGAAGAATGTCAAGATTCACTAAATCTGAAAGCAGAAGGTTCCAAGTCCTCAAGTTTGAAAATTAAACAAGAAGATGAAAAGGACATGAAAAGAGAAACAGAGTTACTAAGGAAGAATCCATTGAGAAACTTTCCACATTGCAGCCTTCCCAGATAA 1140 0.4079 MAECEIQKIDPETEFLSSKRETGNEWEIFKENVRPLKRGRNVNILNNALKSHTDNHLKKSLLNQRRKLIEAVDDYKGEDPLLPWLECMKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSEQYKDDLRYLKVWLEYADNCFDKEVIYAFLDANEIGKTHSDFYISYALHLEVKNKFKAANQTFELGISRNAQPIEKLKAAYRKFLIRSMSRTKPVEEPMEKQAPVRSFGTLLAKGENGARLASLKSDHSSKNNRTRAAPLSIYKDSNASGETGPHQPDQSNSWLKLGARAERNKENNAIPAKWKSFKIPQRPGTRTSVASASACIPVFVDEECQDSLNLKAEGSKSSSLKIKQEDEKDMKRETELLRKNPLRNFPHCSLPR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2875 379 Gene3D - 19 205 - -
Tpr1g2875 379 MobiDBLite consensus disorder prediction 345 367 - -
Tpr1g2875 379 MobiDBLite consensus disorder prediction 240 260 - -
Tpr1g2875 379 SMART mad3_bub1_i 61 185 IPR013212 -
Tpr1g2875 379 Pfam Mad3/BUB1 homology region 1 64 185 IPR013212 -
Tpr1g2875 379 Coils Coil 58 78 - -
Tpr1g2875 379 ProSiteProfiles BUB1 N-terminal domain profile. 68 226 IPR013212 -
Tpr1g2875 379 MobiDBLite consensus disorder prediction 339 379 - -
Tpr1g2875 379 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 23 379 IPR015661 GO:0007094
Tpr1g2875 379 PANTHER MITOTIC SPINDLE CHECKPOINT PROTEIN BUBR1 23 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2875 Tpr-Chr1 33148098 33152146 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2875 K02178 - gmx:100799090 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2875 1 33148098 33152146 Tpr1g2875 1 33148098 33152146 ECH