Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2874 ATGACGGCGGAGGAGGTGTTGAACGTCTTACACAGCAAAGAGATTTCTGATAACGGCGGTGGTGTAGAAGATCATCATAAGATCGTAACGGAGCATTGTAATGGTAAGGAAATTTCTGTTAACGGCAATGTCGGTGGTGAGGTTGTTTCTGATATCGTTGATTCAGATCCGATCGTTACCGTTGACGTTAACAGTAACGGTAATGGTGTTGTAGTTTTAGAGGATCATAAGGTGGAAGGTGAATCTGAAGTTACTGTTATTTCTAATTCTAATGGTTCTGTTGATAAAACGACAATTGTTGATGTCGTTGAACGGGAAGGAGAGATTTATCAAAACGGTTCGGGATCTGATGTGAATCACGTTCACGTTACTGATAATACTGTTGTTGAGGTTCAAAACGGTGCGTTGGATAAAGAATCGAGTGAATGCGCTGTAGAGAGTTCTGAGGACGAGATTCGTGATGAAGTTAGTGATTCTGTTGTGGAGGAAGGAGTGAAGGTTCAGGATCGTGAATTGGAGAGTTTTGAAAACGGTGTCGTTGAGGAGAATGAGATTTGTGATGTTGTTGCTGACGTGGACAAGAGTGATCGCGAATTGGAAGGAGGAGTTGTTGAAAACGGTGCGGTGGATACGGGTGGAGGAGATGTAGAAGAGATAGAGGTTCTGGTTCCTGTTGTTGTTGAGGAGGTTGCTGCTGCTTCTACTGAAGCAGTGGAGGCTGGTGATTCTGATGTGGTGGGAACGGCGGAATCTAAAGATCATGAGAGTGGAGAGAGCGAAAAAGTTGGCGGTGTAGGTGTAGATGCTTCGGGTGAGAAGACCGAAATTTGTGATGTTGAATTGGAAAGTGAAGTTGGTGCTGAAGTGAGTGATTCAGCTGAGAATAAATTGGAAAGTGTAGTTGATGCTGAAGTGAGTGAATCAGCTGAGAAGAACGAAATTGGTGATGTTGAATTGGAAAGTGAAGTTGATGCTGAAGTGAGTGATTCAGCTGAGAAGAAATTGGAAAGTGTAGTTGATACTGAAGTGAGTGAATCAGCTGAGAAGAATGAAATTTGTGATGTTGAATTGGAAACTTCAGTTGATGCTGAAGTCAGTGAATCAGCTGAGACTAATGGAATTCATGATGTTGAATTGGAAACTGTGATTGATGCTGAAGTGAGTGAATCAGCTGAGAAGAATGAAACTCATGATGTGGAATTGGAAAGTGTAGTTGATGCTGAAGTGAGTAATTCAGCTGAGAAGAATGAAATTCCTGTTGATGTTAATGGAGTATGTGATGATACAGATGTGAAGCAATGTGCAGTTGAAGATACTCAAAACGGTTTAGAGAAGGCACCGGTTGAGTCAGTCTCTGATACAATTGTTGAAAATGGTGTGGCAGAGGTTGAGGTGAGTGAATGCACGGAGGGGGAGAATGTGATTCTTGTTGATGTCAGTGAATCAGAGAGGTCTGTTGAGGTATCAGAACCTCAAGTTGTTATTCAAGGAAAAGATTTAGCAGAAAAAATCGAGTCAGGGGTTTTTGATGATGCTGATGAAGGTAAAGATGAAAATGAACCTTCTGTTGATACGAAAACCATTGAAGAGGAGGGCAATGCTGCGCCTTCTGATAATGTTGTCAAGGTTGAAGGTGAATCTATTGACGTGTCTGAGATTAAAACCGATGCAGTGGAGAGTGAAGCTGAACATTCAAAGGAAACAGTGGTGAGTGAAGCTGAGCCTTCAACGGAAACAGTGGCGAGTGAAGCTGAAGCTTCAAACAATGCAATGGAGAGTGAGGCCAGTCTTTCTGTTGATGTTCCAGATTTGAAAACCAATGCTGTGGATAGAGAAGCTGAACTTTCAACTGAAGCCGAACCTCCAGTTGAAGCCGAATCTCCCGTTGAAGCTGAACCTTCAGTTGAAGCTAAAATTTCAGCTGAAGGTGAAGGTAGCAACCCAATAGATGAAGATTTGAAAACACCCCAAGAGGTATCTTCTGCTGATGCTACGGATGCACAGAATCTGGGCACCGAGGTGGTGAAGACGCCATTCTATTGGTTGGTCCGGGTTCCACGATATGATGATGATGAAAATATAAGAGAGCAGATTCAACATGCGGCTCAACAAGTAGAGGAGAAGACTAAAATCCGTGATGAAATTCGATCTGAAAGCCAGGATAAAAGGGCCCTTTGTAAAGAGTATGGCCAAGAATTTAGAGCTGCATTACAAGAAGAGAGAGCTGCTAGGGAGTTACTCAAAGCCAAACGGCAAGAGATGGATTCAGTTCAATCCATAATGAGTAGATTAAACAATGCAATTTCTGTAGGTGATATAGATGCCAAGATTAGAAACATGGAACACATGATCCAGCATGAAACTCTGCCTCTAAAAGAAGAAAAGCAATTGATACGCCAAATCAAACAATTGAAGCAGACGCGTGGCGAACTGTCTACTATTATAGCAAAACAGGATCAATCACAATCTCTAGACGACAAAGAAAGCATTGAAGAGCAAACTAAGCGATTACAGCTTTTGAGGAAGGAATTGGATGTGCTTAGAAATAATGTTCTGAAGGCAGAAACAATAACTAAAGCAGCAAAGAAGAAATCTGACGAAGAAAGTAATCAACTGAGCAAGCTTATGGCTCAGTATAAGGCTGCTGATGACACTCGTCAAGAGGCATTTGTCAAGTTACAGATTTTGAGAAGGCAATTGCACGAGAAGAGCAAATATTTTTGGGAATACAAAAATGCTTCAGTGAGAGCGCAAGAACTAGGAGCACAGCGGGGGAAGAAAGAGGAGGTGCAAAAATTATGTATTGAACAGGCTGAGCGAATACATGAGATGCTAAAGAATGATGAGTTCAGAAGGAGCTATATCCGGTGCAACACCAGGAGTACACTGAGGAGACTGGTAACTTATGATGGCCGAGGGCTTGGTCCTGATGAGGAGCCACCCGTGATTCCTAATGCATTCATTGAAAGATCTCCCAAAAATGATTCTTTGGTCCCACAGTCAACTCCTGAACAACAACAAAAATCAATACCAACAGAATCTGTTACTGTTAATGCAAAGGATGAACCCACTTCCAAGGTTGCGGTGCAAAAACCTGAAATAAGTGAGTCAAGTAAAGCTAAAAAGCCTGCAAAACCTGTTCCAGAGAAGAAGTCAGCGGTTCCAGTTTCTCGTTGGGGGGATGAGTCCGATGAAGATAAGGAACCTAAAGAACCTGTGAGAACAAAGGAGGAAGAGGAGCGGATCTTAAAGGCTGAAAAGGTGAAGAAGGAGGAAGAAGAAGCAAAGCTAAAGGAAATAAAAAGGCTAGAGGAAATTGAGAAAGCTAAGGAGGCACTTCAGAGGAAAAAGCGTAATGCAGAGAAGGCCCAACAAAGGGCTTTATATAAGGCCCAAAAAGAAGCTGAGCAAAAAGAGAAGGAAAGGGAGAAAAGAGCAAGGAAGAAGGAAAAAAGAAAGACAGTTTCTCCCGATCATGCTGTGGAGAATACAGAACAAGAATCTGCAGCTTTACCTACCGCTGAAATTCTGACAAGAACATTGGATGAATCTGATCAAATTGAGAAACCAGCTGAGGTAACAAAAAGGCCAGTGAAACCATCTCAATTCACAAAGCAAAACAAGGTAAAATCTTTACCCATGGCTATTCGCAACCGAGGGAAGAGACGAATTCAACCATGGATGTGGTGGGCTCTAATTGCAGTTCTGGTTATTGCTGCATTGTTTTATATTGGGAATAACAGCTCCTTGATATCTTCTTTTCAAAGCTTTGGTTTCTGA 3780 0.4217 MTAEEVLNVLHSKEISDNGGGVEDHHKIVTEHCNGKEISVNGNVGGEVVSDIVDSDPIVTVDVNSNGNGVVVLEDHKVEGESEVTVISNSNGSVDKTTIVDVVEREGEIYQNGSGSDVNHVHVTDNTVVEVQNGALDKESSECAVESSEDEIRDEVSDSVVEEGVKVQDRELESFENGVVEENEICDVVADVDKSDRELEGGVVENGAVDTGGGDVEEIEVLVPVVVEEVAAASTEAVEAGDSDVVGTAESKDHESGESEKVGGVGVDASGEKTEICDVELESEVGAEVSDSAENKLESVVDAEVSESAEKNEIGDVELESEVDAEVSDSAEKKLESVVDTEVSESAEKNEICDVELETSVDAEVSESAETNGIHDVELETVIDAEVSESAEKNETHDVELESVVDAEVSNSAEKNEIPVDVNGVCDDTDVKQCAVEDTQNGLEKAPVESVSDTIVENGVAEVEVSECTEGENVILVDVSESERSVEVSEPQVVIQGKDLAEKIESGVFDDADEGKDENEPSVDTKTIEEEGNAAPSDNVVKVEGESIDVSEIKTDAVESEAEHSKETVVSEAEPSTETVASEAEASNNAMESEASLSVDVPDLKTNAVDREAELSTEAEPPVEAESPVEAEPSVEAKISAEGEGSNPIDEDLKTPQEVSSADATDAQNLGTEVVKTPFYWLVRVPRYDDDENIREQIQHAAQQVEEKTKIRDEIRSESQDKRALCKEYGQEFRAALQEERAARELLKAKRQEMDSVQSIMSRLNNAISVGDIDAKIRNMEHMIQHETLPLKEEKQLIRQIKQLKQTRGELSTIIAKQDQSQSLDDKESIEEQTKRLQLLRKELDVLRNNVLKAETITKAAKKKSDEESNQLSKLMAQYKAADDTRQEAFVKLQILRRQLHEKSKYFWEYKNASVRAQELGAQRGKKEEVQKLCIEQAERIHEMLKNDEFRRSYIRCNTRSTLRRLVTYDGRGLGPDEEPPVIPNAFIERSPKNDSLVPQSTPEQQQKSIPTESVTVNAKDEPTSKVAVQKPEISESSKAKKPAKPVPEKKSAVPVSRWGDESDEDKEPKEPVRTKEEEERILKAEKVKKEEEEAKLKEIKRLEEIEKAKEALQRKKRNAEKAQQRALYKAQKEAEQKEKEREKRARKKEKRKTVSPDHAVENTEQESAALPTAEILTRTLDESDQIEKPAEVTKRPVKPSQFTKQNKVKSLPMAIRNRGKRRIQPWMWWALIAVLVIAALFYIGNNSSLISSFQSFGF* 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 284 351 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 994 1023 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 235 271 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 545 571 - -
Tpr1g2874 1259 Coils Coil 688 708 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 326 351 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 506 651 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 572 595 - -
Tpr1g2874 1259 Coils Coil 747 767 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 994 1209 - -
Tpr1g2874 1259 Coils Coil 830 857 - -
Tpr1g2874 1259 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 474 1259 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 1181 1195 - -
Tpr1g2874 1259 PANTHER CALPONIN-LIKE DOMAIN PROTEIN 474 1259 - -
Tpr1g2874 1259 Coils Coil 1073 1153 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 1055 1144 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 246 261 - -
Tpr1g2874 1259 MobiDBLite consensus disorder prediction 289 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2874 Tpr-Chr1 33119460 33125520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2874 - - mtr:MTR_1g035040 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2874 1 33119460 33125520 Tpr1g2874 1 33119460 33125520 ECH