Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2872 ATGATGATGAGGAAGCAAAAACAAGTAGAGAAAAAAACAAAGACATTCTTACTAGAAAAATCACCAACAAAAGAATACCAAATAACAGCTCCAAGTCATGATGATCAATATTATTCCAAAGTCACAACTATAGTCACAAAAAAATCACCTCCTCCAATTGAATTTCCTACTTCACCACAACTCATATTTGGAGAAGAAATAATTCATTTTAGTCATCCACAACATCCTCTTTCAATGGTGGACCTTCCTGACCTATTCATTTGTGTAGGATGTAAAGAATATGGTTCTGGAAAAAGATTTGTTTGTCAACAATGTGATTATCAACTTCATGACTTTTGTGCTTTGGCTCCTCCTGCTCTTAAGGCTCATCCTTTCCATTCTCAACATGCAGTTTTGTTCCATTCCAAACCAGTGAAAAGTGGAATGACAAAATCCAAATGTGACGTTTGTGGCAAAGTAACAAAAGGCTATGCATTCCTATGCACAGCATGTGCTTTCCAAATGCATCCATGTTGTGCAATGCTCAACACAGAAATTGAATTCCCATCTCATCCACACACTCTCAAACTCACACCTTCAACCACCACGGCCACAGCCGCAACAAACACGGACCACTCCAACACGATCGTTTGCAACGAGTGCAAGAAACGAAGGTCGGGGAAAGTGTATCGGTGCACAGTGTGCAACTATAATCTTCATGCATTTTGTGCTAAGAATAAAGTTAATGGTCTTCAAGCTAATGGTATTAGGGTTCCTGAAAAACCAAGTGTTCTTTCTGCTGCAGCTAAAGTTGCTTCTCAAGTTGTGATTGAATTTATTGGTGGGTTTGTTGAAGGTATTGGTGAAAGTATGGGTGAAGTTCTAATTCAAAATATTACCAAAGGAGGAAATGCCAATCACACTGGTACCAATAATAATACGAGTACAAAACCTCGTAAATAA 942 0.3832 MMMRKQKQVEKKTKTFLLEKSPTKEYQITAPSHDDQYYSKVTTIVTKKSPPPIEFPTSPQLIFGEEIIHFSHPQHPLSMVDLPDLFICVGCKEYGSGKRFVCQQCDYQLHDFCALAPPALKAHPFHSQHAVLFHSKPVKSGMTKSKCDVCGKVTKGYAFLCTACAFQMHPCCAMLNTEIEFPSHPHTLKLTPSTTTATAATNTDHSNTIVCNECKKRRSGKVYRCTVCNYNLHAFCAKNKVNGLQANGIRVPEKPSVLSAAAKVASQVVIEFIGGFVEGIGESMGEVLIQNITKGGNANHTGTNNNTSTKPRK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2872 313 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 48 301 - -
Tpr1g2872 313 Pfam C1 domain 70 114 IPR004146 -
Tpr1g2872 313 Pfam C1 domain 182 237 IPR004146 -
Tpr1g2872 313 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 48 301 - -
Tpr1g2872 313 SUPERFAMILY Cysteine-rich domain 91 186 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2872 Tpr-Chr1 33093670 33096664 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2872 - - gmx:100815805 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2872 1 33093670 33096664 Tpr1g2872 1 33093670 33096664 ECH