Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2815 ATGCCCCCGTCACGCCGACGTGGAGCAAACAAAGCTAAGGCCAATGCGCATTTGAAACTCGGCGATCTCGTTCTAGCTAAGGTTAAGGGATTCCCGGCTTGGCCTGCTAAAATAAGCAGGCCTGAAGATTGGGAAAAAAACCCGGATCCGAAGAAATTTTTTGTCGAATTTTTCGGGACCGAAGAAATAGCTTTTGTTGTCCCTGCGGATATTCAGGCATTCACCAGTGAGGTCAAAACTAAGTTGACTGCTCGGTTGCATGGTAAGACGAAGTGCTTTACTCAAGCTGTGAGGGAAATCTGTGCAGCATATGATGAGTTAGAGAAACAGAAAGTTGGTGGTTTGACAGATGACACTGATGATGCTCATGCCCCTTCTTTTGATGGGGCAGTTGGTGACATAAAGGATGCTACTGATGCTGTATTAAATGTAGAAAAATCTAAGACTATTATGGAAGACGTTGGCTCAAATTTGGAGCACTATGAACAAAGATGTGGAGAAAGGGATGACCAAGATAATAAACCGTCTGCATCTGGCCGTCCAACTGACAGTTCATCTCCAGTTTTGTCACCTGTGCTGGAAAGTAAATCTTCCATTGGTACAGAACCAAACAAGCACACTATCAGATCTGGCCTTGAGGATAAATCATGTCTGAAAAAGGAAGTTTCTGATTGTAAGGATGTATGCAATGTTGATGACTTCAAGCAAGCTAATAATGTGCAGAGTGTTTCAACTGATGGGAACAAGGCAAGAAAGCTTGTTACCGGCTCAAGGAGGAGAAGCGAAGCTGCAGCAGATAAAGAAATAAGTGGATTTAGTAAAGCACTTTCAAAGGGTGAAAGTTCTGGAGAGACAGTGAAAGGTGGGAAAAAAGTTAAAAATGCATTTTTTGTCGATTCTGCAGATGCTTCTAAATCAGGCCCTGGTATTAACAATGGAAATAAAGATAAGAACTTGCTGAAAGCTACAACAAGTCTTAAGGTAAAGAATGAGTTGCAGGAGAAATTTGTTGATTCTAAGGAGGCTGATAGAAATAATTCTTTTAAGAAAAACAAGACCCAAGTTCAAAGAAAGCGTAATTTGGGAACGAACGAAACTTTACACGCTACCAAGAAGTTCAAGCGTATGGATGCCAAAGACAACGAACCTTTAAAATCTCTCCCTGAAGATATGAAGAGCGCTTCACCTGGCTTTCCTGTTGTTGTTGACAAGGCATTGGAAAAATCAGAGTTGAAAAGGTCTTTATCATGTTTGAAAACAGAGAAAGGGTTGTCATCAAGGGCTCAGACTGCTATTGCAGATTCCGATAATTCTGTTTGTGAAGTGCTGAGTGGAACAAAACATCACATCCAAGTACGGAGGAGACGCAGACCTGTTTTCCGTATTGACGATGATGATGACGAATCTAAGACTCCTGTTCATGGAGGGGATTCTAAAAATATTAAATCACCCTCTCTTGTTTCAGAGCCTGTGAAGAGCAATGATCCATTGTTAGAGAATGGTGATGTTTCTCAGCTGACTAAGGGGAAACCTAGTGCACTTGAGGATAGCCATTTGAATGCACACTTAATTAAATTATGTGATGACTCTTTGCCTACAGGGCATCCTCAAAAAGAGAATGCTGATGAAATTGTTGCTGTCAATTCAGCTCAAATCCCTGAGCGATTAGATCGAAAGCTTTTTCCTTCGAATGTGGAAAAATTGAGCTCCATCTCTCCAGTAAATTCTCCTCAGTCTCTTTCTACAACAAAGTCAAATGCCAAGCGACATAAATCTTCTAAAGCTTTGCCTGAAGTTTTCAGTAATGCTACTCTAAAGAAGGCTGAGAATGGGTCTTCAAAGAGTTTAATTAGCAGCAGCACTTTGAAAAGCCAAATTATAACTCATAAAAAGAAGCCTGCGTCTTCTGTGGAAAGGTCTAAAACTACCCCAAAGACATTACCACAGTCAGTTGAAGTTCATACACCAGAAAGTTTAAAGGAACCTGATGGTTTTCATGTTGATAGAATAGAGTTGGGCACAGAAGAAAAAAGTAGCCTATATGTTGGTTCTGGGACTCCAGAAAATGCCAAGACTATGAAGCATCTTATTGCAGTTGCCCAGGCAAAAAGGAGACTAGTAGCTCAATTTCAGTGTCATCCTTTTGACCTTCATAATGCTCAAGTGGGAACACCTAGCCCCTCTATAGTGCAGCCATTTCTGTCTGTGTCTAGCAATAATGGCCAGGCAGATGTGCAGGGAGTTAATGAGCTGCCATCATTAGTGTCTCCATCAACCAATGGGTATCACTCCATTTCTCAAAATCAACTTGATGCTGAAGAAAATGAGGAGAGAAGACTTGGTTTGGGGCAAAGCGGTGTTGTGGGTTCTCTGGGTGGGGGTACTGAGGCTGCTATTGCGCGTGATGCCTTTGAAGGAATGATTGAGACTTTGTCAAGGACCAAGGAAAGTATTGGGCGTGCAACACGTCTTGCCATTGATTGTGCTAAGTATGGTTTTGCCAATGAGGTTGTTGAACTTCTTATCCGAAAGCTAGAAAGTGAAACTAGTTTTCATCGTAAAGTGGATTTGTTCTTTCTTGTTGATTCTATAACCCAGTGCTCAAATAATCAAAAAGGCATTGCAGGTGCTTCCTACATTCCTGCAGTTCAAGGAGGATTGGCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGGACCAGTGCCCGTGAAAATCGTCGCCAATGTCTCAAGGTTTTAAGATTGTGGCTTGAGAGGAAAATTTTTCCTGAATCAGTTCTTCGCCGTTATATGAATGATATTGGAGGTTCGGGTGATGATATGATAGTTAAGCATTCTTTCCGGCGTCCTTCTCGAGCAGAACGATCTGTGGATGACCCAATTAGAGAAATGGAGGGCATGCTTGTTGACGAGTATGGAAGTAATGCTACATTTCAGCTGGCTGGCATTTTATCTTCGCGCGTGTTTGAAGATGAAGACGATGATTTTCCCAATGTGTCTCCAGCGGATCCTACTCACACTCTTGTGGATTCAGAAACTTCCACCGTTACCCCAAGTGACAAACGCAACTGTATTTTGGAAGATGTTGATGGAGAGCTAGAAATGGAGGATGTTTCAGGTCATCCAAAGGATGAAAGGCCTGTATTGTTGAACAGTACCTTGGAAATGGATTTTCAACTTCAGGGCTCAGATAGGATCTTGGATCCAGCATCAAACATTTCTGAAGAGGTACATGTAAATCTTGAGGGTTCTCCTCCATTACCACTTGATTCACCTCCTACTCCCCCACCGTTGCCTTCTTCACCACCACCACCTCCATTATCTCCATCTCCTCCCCCACCTCCGCCACCCACATTGCAACAACCCACACCTCCGCCACCCACATTGCAACAACCCCCACCTCCGCCGCCCACATTGCAACAACCCCCACCTCCGCCGCCCACATTGCAACAACCCCCACCTCCTCCTTTACCACCCACTGGTCCTACACCACCATTGATTTCTCAACCTTCTGGAACAGCTCAGCCTTCAACTTTTACCCAGGCGTCAGTGACATCTCAATCATCACACCAGTCATCACCACTATCAGGGTATCAGCAGCTTCATAACTGCAATGGCACAGCTAATGGCATCCAAATAGTTCAAATGACTGGAAATTCTTTTCCTGGGGGCCAAACTATTTCAGTTCTGAAGAATGAAATGTTGCCACAGCCATCTGCTTGCTTTCCTCCAATGGCAGGTTGCAGCTCTCAAGAACCTTCTGCGTTAAACCCTACAAGGCAATTTCAGCTGGGTAATCCTCGCTTTGCTCCAAGACACATGCATCCTACCCCACCCCAAAATCCATCTCCTAATCAGTATTCATATCCGAAACCTTCAGTTCAGCAGCATTTTCCACATTCTTTCTGCCCTCCATATGCATTGACATCCGTTCCAGATGGGCAGAGGCAATTTGTTGCTAATGAGCAATGGAGGATGTCAACAAGTGAATTTAAATCAAACAATCAACATGGTTTATGGAGAGGGATAAATCCTTCATGTCCGGGTCCACCCTTTGGGCAGGAAGATAATTTCCGTCCGCCACTTGAAAGACCACCAATGAGCAGCGTAGGTTTTCAGCATGCGAACCCCAACAATATACCTGTTCCTCCTCCGAAGTCAGGTAGTTTCTCCAATTTTACACTTTATACTTTCCTATTTCTTAATCAGTTAGTTCCCTTTGAATTCCACATGTTAAGAAACTGTATTTATGCATCAAGATCATTTTTTCTTCATCAGGATATGGTGTTCCTCAGATGTTCCCCTGTAGACCAGACATTCCTACTCTTAATTGTTGGAGGCCTACCTGATGTTGATTGA 4356 0.4339 MPPSRRRGANKAKANAHLKLGDLVLAKVKGFPAWPAKISRPEDWEKNPDPKKFFVEFFGTEEIAFVVPADIQAFTSEVKTKLTARLHGKTKCFTQAVREICAAYDELEKQKVGGLTDDTDDAHAPSFDGAVGDIKDATDAVLNVEKSKTIMEDVGSNLEHYEQRCGERDDQDNKPSASGRPTDSSSPVLSPVLESKSSIGTEPNKHTIRSGLEDKSCLKKEVSDCKDVCNVDDFKQANNVQSVSTDGNKARKLVTGSRRRSEAAADKEISGFSKALSKGESSGETVKGGKKVKNAFFVDSADASKSGPGINNGNKDKNLLKATTSLKVKNELQEKFVDSKEADRNNSFKKNKTQVQRKRNLGTNETLHATKKFKRMDAKDNEPLKSLPEDMKSASPGFPVVVDKALEKSELKRSLSCLKTEKGLSSRAQTAIADSDNSVCEVLSGTKHHIQVRRRRRPVFRIDDDDDESKTPVHGGDSKNIKSPSLVSEPVKSNDPLLENGDVSQLTKGKPSALEDSHLNAHLIKLCDDSLPTGHPQKENADEIVAVNSAQIPERLDRKLFPSNVEKLSSISPVNSPQSLSTTKSNAKRHKSSKALPEVFSNATLKKAENGSSKSLISSSTLKSQIITHKKKPASSVERSKTTPKTLPQSVEVHTPESLKEPDGFHVDRIELGTEEKSSLYVGSGTPENAKTMKHLIAVAQAKRRLVAQFQCHPFDLHNAQVGTPSPSIVQPFLSVSSNNGQADVQGVNELPSLVSPSTNGYHSISQNQLDAEENEERRLGLGQSGVVGSLGGGTEAAIARDAFEGMIETLSRTKESIGRATRLAIDCAKYGFANEVVELLIRKLESETSFHRKVDLFFLVDSITQCSNNQKGIAGASYIPAVQGGLARLLGAAAPPGTSARENRRQCLKVLRLWLERKIFPESVLRRYMNDIGGSGDDMIVKHSFRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLAGILSSRVFEDEDDDFPNVSPADPTHTLVDSETSTVTPSDKRNCILEDVDGELEMEDVSGHPKDERPVLLNSTLEMDFQLQGSDRILDPASNISEEVHVNLEGSPPLPLDSPPTPPPLPSSPPPPPLSPSPPPPPPPTLQQPTPPPPTLQQPPPPPPTLQQPPPPPPTLQQPPPPPLPPTGPTPPLISQPSGTAQPSTFTQASVTSQSSHQSSPLSGYQQLHNCNGTANGIQIVQMTGNSFPGGQTISVLKNEMLPQPSACFPPMAGCSSQEPSALNPTRQFQLGNPRFAPRHMHPTPPQNPSPNQYSYPKPSVQQHFPHSFCPPYALTSVPDGQRQFVANEQWRMSTSEFKSNNQHGLWRGINPSCPGPPFGQEDNFRPPLERPPMSSVGFQHANPNNIPVPPPKSGSFSNFTLYTFLFLNQLVPFEFHMLRNCIYASRSFFLHQDMVFLRCSPVDQTFLLLIVGGLPDVD* 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2815 1451 SMART 558neu5 803 934 IPR006569 -
Tpr1g2815 1451 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 1089 1152 - -
Tpr1g2815 1451 Pfam CID domain 803 927 IPR006569 -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 568 594 - -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 177 204 - -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 461 475 - -
Tpr1g2815 1451 ProSiteProfiles CID domain profile. 796 937 IPR006569 -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 164 204 - -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 608 657 - -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 1167 1196 - -
Tpr1g2815 1451 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 452 - -
Tpr1g2815 1451 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1121 1387 - -
Tpr1g2815 1451 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 451 1117 - -
Tpr1g2815 1451 Gene3D - 797 936 IPR008942 -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 339 358 - -
Tpr1g2815 1451 CDD HDGF_related 18 103 IPR035496 -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 568 586 - -
Tpr1g2815 1451 PANTHER PROTEIN HUA2-LIKE 1 1 452 - -
Tpr1g2815 1451 PANTHER PROTEIN HUA2-LIKE 1 1121 1387 - -
Tpr1g2815 1451 PANTHER PROTEIN HUA2-LIKE 1 451 1117 - -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 461 502 - -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 608 631 - -
Tpr1g2815 1451 SUPERFAMILY Tudor/PWWP/MBT 13 108 - -
Tpr1g2815 1451 Gene3D - 10 113 - -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 476 490 - -
Tpr1g2815 1451 Pfam PWWP domain 21 104 IPR000313 -
Tpr1g2815 1451 SMART PWWP_4 18 75 IPR000313 -
Tpr1g2815 1451 MobiDBLite consensus disorder prediction 639 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2815 Tpr-Chr1 32310855 32322856 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2815 - - gmx:100800279 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2815 1 32310855 32322856 Tpr1g2815 1 32310855 32322856 ECH