Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2382 ATGGCCAAGCTAAGCATCACTATGTTCAGCTTGTTTGCAATTCTACTAGTGCACAGCCATGCTAAGATTATTGTAACTACCATTGATACTCCAACTCCAGCACCACAGCCTAACTTGCCCATGAATGGCACCACTGAAGGTAGTCTTCAACCAGAAGAATGTGGACCTCGTTGTGCATATCGATGCTCAAACACACAGTACAAGAAGCCATGCTTGTTCTTCTGTCAAAAATGTTGTGCCAAATGCTTGTGTGTGCCTCGTAGTACCTATGGAAACAAAGAAGCATGTCCATGCTATAACAACTGGAAGACCAAAAGAGGAGGACCCAAATGTCCTTAA 339 0.4366 MAKLSITMFSLFAILLVHSHAKIIVTTIDTPTPAPQPNLPMNGTTEGSLQPEECGPRCAYRCSNTQYKKPCLFFCQKCCAKCLCVPRSTYGNKEACPCYNNWKTKRGGPKCP* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2382 112 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 3 112 - -
Tpr1g2382 112 Pfam Gibberellin regulated protein 53 112 IPR003854 -
Tpr1g2382 112 PANTHER GIBBERELLIN-REGULATED PROTEIN 13 3 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2382 Tpr-Chr1 26719772 26722235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2382 - - sly:101252867 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1439 6 15535861 15537338 Tpr1g2382 1 26719772 26722235 PCT