Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2233 ATGTCAACTGAGAATCAGATACACGACGGTGCAATTGCAGAAGAAGAAAGAAGACCTCTTATTGACTCCTCAATTCTTATTGTCCATCAAAATGGAGAAGACGAAACCATCATCCCTGTTCCTAATCAACGCCTTGTTTCTCTCGATGTCTTCCGCGGCCTCACTGTTGCGTTAATGATATTAGTTGATGATGTGGGACGGGCTTTCCCATCTTTGAATCATTCTCCATGGTTTGGGGTCACACTCGCTGATTTTGTAATGCCGTTTTTTCTCTTTGGGGTTGGCGTTTCAATCGCTCTGGTGTTCAAGAAAGTCTCTAGCAAACCAAATGCAACAAAAAAAGTAATATTGAGGACGATTAAGCTTTTTCTTTTGGGGCTCTTACTACAAGGTGGGTATTTCCATGGGCGTGGTAATTTAACTTATGGACTTGATTTAAGTAAGATACGCTGGTTTGGTGTACTTCAGAGGATATCCATAGGATATTTCCTGGCCTCAATGTCAGAGATTTGGCTTGTGAACAATAATATTTTGGTTGATTCACCAGCAGCGTTTGTCAGGAAATACTCCATCCAGTGGATCTTTTCTATCTTACTTGGCTCAGTATACCTTTGCTTGCTCTATGGCCTCTATGTTCCAAATTGGAAGTTCGGATATTCTAACTTGCTTTGGTCTGGTCATGTATCAACTATTCAAAATGTTCATTGTGAAACGAGGGGTAGCCTTGATCCTCCTTGTAATGCTGTGGGTTTTATTGATAGATTAATTCTTGGTGAAGATCATATGTACCAGCGTCCTGTCTACAGAAGAACAAAGGAGTGCAGTGTCAATTCTCCTGATTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGCCTTGCACCATTTGACCCGGAGGGTATTTTGAGTTCACTGATGGCTGCCATTACATGTTTCGTGGGATTGCAATTTGGACATATACTTGTAATTTTTCAGGCTCACAAGCAGAGGGTACTCCTTTGGTCTGTGTTTTCCTTCTCTCTATTGGTAGTCGGATATATTCTGGAGATTTTAGGAATTCCTTTATCAAAAGCACTCTACACACTAAGTTTCATGTTCATCACCGCAGGTGCATCGGGCTTGGTTTTGACTGCTATATACTACATTGTTGACATAGAACGTCTCAGAAAGCCCACAGTTTTACTACAATGGATGGGAATGAATGCCCTTATTGTATACGCATTGGCTGCTTGTGACATTTTCCCAGCAATTATCCAGGGTTTCTATTGGCGTTCTCCTGAAAATAACCTGGTTGACTCCAGTGAAGCTTTAATACAGAACGTATTACATTCCGAGAAATGGGGTACACTGGCCTTTGTAATAATTGAGATTTTATTCTGGGGTCTTTTGGCTGGTTTCCTCCACAAGAAAGGGATATATATAAAACTGTAA 1431 0.4123 MSTENQIHDGAIAEEERRPLIDSSILIVHQNGEDETIIPVPNQRLVSLDVFRGLTVALMILVDDVGRAFPSLNHSPWFGVTLADFVMPFFLFGVGVSIALVFKKVSSKPNATKKVILRTIKLFLLGLLLQGGYFHGRGNLTYGLDLSKIRWFGVLQRISIGYFLASMSEIWLVNNNILVDSPAAFVRKYSIQWIFSILLGSVYLCLLYGLYVPNWKFGYSNLLWSGHVSTIQNVHCETRGSLDPPCNAVGFIDRLILGEDHMYQRPVYRRTKECSVNSPDYGPLPPDSPGWCLAPFDPEGILSSLMAAITCFVGLQFGHILVIFQAHKQRVLLWSVFSFSLLVVGYILEILGIPLSKALYTLSFMFITAGASGLVLTAIYYIVDIERLRKPTVLLQWMGMNALIVYALAACDIFPAIIQGFYWRSPENNLVDSSEALIQNVLHSEKWGTLAFVIIEILFWGLLAGFLHKKGIYIKL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2233 476 PANTHER LD22376P 14 476 - -
Tpr1g2233 476 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 44 168 IPR012429 -
Tpr1g2233 476 PANTHER OS05G0155700 PROTEIN 14 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2233 Tpr-Chr1 25100769 25106723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2233 K10532 - gmx:100802361 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0868 6 7476738 7479574 Tpr1g2233 1 25100769 25106723 PCT