Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1985 ATGGGTAAGATTCTGAGAGAAACATCGAGGCCTTCCTCAAATTCATCACCGGCATCACCTTCTTCAGGTCCGGCAACAACTTCATCGACATCGATAACCGAAACGGTTAAAGGTTCTCACAGGTTCAAGATTTCGGGGTATTCGTTATCGAAAGGGATTGGAATTGGGAAGTACATAGCATCGGAGATATTTTCTGTTGGTGGTTACGATTGGGCGATTTATTTCTATCCTGATGGGAAAAGTTTGGAGGATAATGCTACGTATGTGTCGCTTTTCATAGCGCTTGCAAGCGAAGGAACTGATGTTAGGGCACTTTTTGAATTGACACTTTTGGATCAGAGTGGGAAAGAGAGGCATAAGGTTCATAGCCATTTTGAGAGAACGTTGGAGAGTGGACCTTACACGTTGAAATATCGTGGTAGCATGTGGGGATACAAAAGATTTTTCAAGAGAGTGTCACTAGAGACATCAGATTACCTTAAAGATGACTGCCTTAGTGTTAATTGTAGCGTTGGTGTCGTGAGGTCACACACAGAGGGCCCTAAAACATTTTCAATTGCAATACCACCTTCTACTATTGGTCACCAGTTCGGGAAGCTACTGGAAAGTGGAAAGGACAGTGATGTGAGTTTTGAAGTGAATGGTGAAATTTTTGCAGCTCATAAATTGGTACTAGCTGCTCGATCAGCTGTTTTTAGAGCTCAACTTTTTGGTCCTATGAAAGATAAGAATACACAATGTATAAAAGTTGAAGACATGGAGGCTCCAGTTTTCAAGGCATTGCTTCATGTTATATATTGGGACTCACTGCCTGACATGCAAGAGCTTACTGGGATTAACTCAAAATGGGCAACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGGCTTAGATAGACTTAGGCTGATGTGTGAAGCAAGTTTATGTGAAGATGTTGCAATAAACACTGTGGCTACAACTTTAGCTTTGGCAGAGCAGCATCATTGTTTCCAGCTGAAAGCAGTCTGTCTGAAATTCATTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTCGAGTATTTGAAGGAAAGTTGTCCATCTGTTTTGACTGAGCTTTTGGAGTATGTGGCCAGATTTACTGAGCATTCAGACTTCCTGTGCAAGCATAGGAACGAAGCAATACTTGATGGCAGCGATGTAAATGGAAGGCGGGTGAAACAAAGAATATACTGTGAAAAATGA 1245 0.4225 MGKILRETSRPSSNSSPASPSSGPATTSSTSITETVKGSHRFKISGYSLSKGIGIGKYIASEIFSVGGYDWAIYFYPDGKSLEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRVSLETSDYLKDDCLSVNCSVGVVRSHTEGPKTFSIAIPPSTIGHQFGKLLESGKDSDVSFEVNGEIFAAHKLVLAARSAVFRAQLFGPMKDKNTQCIKVEDMEAPVFKALLHVIYWDSLPDMQELTGINSKWATTLMAQHLLAAADRYGLDRLRLMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNEAILDGSDVNGRRVKQRIYCEK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1985 414 Gene3D Potassium Channel Kv1.1; Chain A 183 310 IPR011333 -
Tpr1g1985 414 SUPERFAMILY POZ domain 184 314 IPR011333 -
Tpr1g1985 414 CDD BTB_POZ_BPM_plant 193 313 - -
Tpr1g1985 414 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 35 175 IPR008974 GO:0005515
Tpr1g1985 414 Gene3D - 316 392 - -
Tpr1g1985 414 SMART BTB_4 207 316 IPR000210 GO:0005515
Tpr1g1985 414 CDD MATH 38 171 IPR002083 GO:0005515
Tpr1g1985 414 SUPERFAMILY TRAF domain-like 34 173 - -
Tpr1g1985 414 ProSiteProfiles MATH/TRAF domain profile. 37 171 IPR002083 GO:0005515
Tpr1g1985 414 Pfam BTB/POZ domain 198 314 IPR000210 GO:0005515
Tpr1g1985 414 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 19 390 - -
Tpr1g1985 414 ProSiteProfiles BTB domain profile. 207 266 IPR000210 GO:0005515
Tpr1g1985 414 CDD BACK_AtBPM-like 313 376 IPR034090 -
Tpr1g1985 414 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 19 390 IPR045005 GO:0016567
Tpr1g1985 414 MobiDBLite consensus disorder prediction 7 34 - -
Tpr1g1985 414 MobiDBLite consensus disorder prediction 1 34 - -
Tpr1g1985 414 SMART math_3 42 154 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1985 Tpr-Chr1 20305521 20309262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1985 K10523 - gmx:100811065 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3591 6 39011068 39014635 Tpr1g1985 1 20305521 20309262 PCT