Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1725 ATGGTTGCTGCTGCTTCAATGGCATGTTTGATGGTAGCAGCGCCATGGAATTTGAAGTCACCACCAACAACAACACTCTCTTCTTCTAATACTACGCTCAAATTCAAATTGAAATGTTGTGCGACAACACAGCAGCAGCAGCCTTTAGTTCACAACGACGACCTTCAAGCTCTCTTACAGATTCTTCCTTCCGATTTGCATCACAATCTCCTCAACCAACCAAATCGTCCTCAACTTTTGGAGGTTATAATGGATTTAGGCCGTTTTCCTGAAGCGCGTTATCTAGGCAAACACGGAAACCACTATCTAAGAAATTCTGAGGTAACTATCAAAGAGTTGGAATATGCTGAAGGAGCTGTTGGAGATTTTGGTAAGGATAATAGAGCTGGTATTGAAGGTACTTTGCATAGAATATCTGCAATAAGGAGTAGGAATGGTGGCATTGTTGGTTTGACCTGTCGAATTGGGAGGGCAGTTACTGGCCACATTGACATGGTTTATGATCTTCTTCAATATGGCAAGAGCATTTTATTTCTTGGAAGGCCTGGCGTTGGCAAGACTACTGTTATGAGGGAGATTGCTCGTGTACTGTCGGATGATTTTCACAAAAGAGTGGTCATTGTCGATACCAGTAATGAAATTGGAGGCGACGGGAATATTCCTCATGCAGCAATAGGTGGTGCACGGAGAATGCAAGTGCCCATGCCATCAATGCAACATAGTGTGATGATTGAGGCAGTAGAAAATCATATGCCTGAGGTGATTATAGTAGATGAAATTGGCACAGAAGCTGAAGCTCGTGCTTGCCGGTCGATTGCTGAGCGAGGCATCATGCTTATAGGGACTGCTCATGGACATCAGATTGATAATGTCATGAAGAATCCTACACTCTCTGACCTGATTGGCGGAATTGAAAGCGTTACTCTGGGAGACGTCGAAGCCAGAGCAAGAAAATGTCAGAAAACTATTCTTGAGAGGAAAGCTCCTCCAACATTTGATTTCTTGATTGAAATGAGAGACAGACACTACTGGATTACACATCAGACCGACAAAAGTGTAGATATGTTGCTTCGAGGCAAGATCCCACAGGTCGAGGTAAGAAAAAGAGATGAAAACAGCAAGGTTGTGATCGAAAAATCTAAAGCATATGATAAATGCCAAATTTGA 1167 0.4284 MVAAASMACLMVAAPWNLKSPPTTTLSSSNTTLKFKLKCCATTQQQQPLVHNDDLQALLQILPSDLHHNLLNQPNRPQLLEVIMDLGRFPEARYLGKHGNHYLRNSEVTIKELEYAEGAVGDFGKDNRAGIEGTLHRISAIRSRNGGIVGLTCRIGRAVTGHIDMVYDLLQYGKSILFLGRPGVGKTTVMREIARVLSDDFHKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVPMPSMQHSVMIEAVENHMPEVIIVDEIGTEAEARACRSIAERGIMLIGTAHGHQIDNVMKNPTLSDLIGGIESVTLGDVEARARKCQKTILERKAPPTFDFLIEMRDRHYWITHQTDKSVDMLLRGKIPQVEVRKRDENSKVVIEKSKAYDKCQI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1725 388 SMART AAA_5 172 328 IPR003593 -
Tpr1g1725 388 CDD AAA 167 262 - -
Tpr1g1725 388 PANTHER EXPRESSED PROTEIN 23 387 - -
Tpr1g1725 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 316 IPR027417 -
Tpr1g1725 388 Pfam Sporulation stage III, protein AA 154 301 IPR045735 -
Tpr1g1725 388 PANTHER KINASE-RELATED 23 387 - -
Tpr1g1725 388 Gene3D - 154 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1725 Tpr-Chr1 16520419 16523863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1725 - - mtr:MTR_1g076810 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1725 1 16520419 16523863 Tpr1g1725 1 16520419 16523863 ECH