Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1722 ATGTCAGTCTCAAATGATCCATTAGTGATATCATTTGGTGAGATGCTGATAGATTTTGTTCCTGACAAATCTGGTGTATCCTTGGCTGAGTCTTATGCTTTCATCAAAGCACCTGGTGGTGCCCCTGCCAATGTGGCTTGTGCTGTATCAAAACTTGGTGGCAATGCTGCCTTCATTGGCAAGGTAGGGGACGACGAGTTTGGAAAGATGTTAGCTGACATCTTGAAGAAAAATGGGGTGAATACAAATGGTGTTAGTTTTGACAAAGAGGCTAGAACTGCATTGGCTTTTGTGACATTGAGAAGCGACGGAGAGAGGGAGTTCATGTTTTACAGAAATCCTAGTGCAGATATGTTACTGAAAGAATCTGATTTGAAAATGGATTTGATTAAGCAAGCAAAGATATTTCATTATGGATCTATTAGTCTTATTTCTGAGCCATGCAGATCTGCTCACATGGCTGCCATGAAAGCTGCTAGAGAAGCTGGTGCTTTATTGTCCTATGATCCAAATGTGAGGCTTCCTTTGTGGCCTTCTGCTGAGGCTGCTAGGTCTGGAATCAAAAGTATTTGGAATGAGGCTGATTTTATTAAGGTGAGTGATGATGAAGTTGAATTTCTTACACAAAAAGATCCTCAGAATGAAGAGGCTGTTATGTCTCTATGGCATGACAAGTTGAAGTTGCTTCTTGTTACTGATGGAGAGAAGGGTTGCAGATATATCACTAAGAAATTTAAAGGAAAGGTAGGTGGATTTTCGGTGAAGGCAGTTGACACGACTGGTGCTGGTGATTCATTTGTTGGTGCAGTTCTCAAAGCCGCGGCCAAAGACCCTTCCATATTTGATGATGAACCAAAATTGAAAGAGGCTTTGTTATTTGCAAATGCTTGTGGAGCAATGTGTACAACACAGAAAGGAGCCATTCCTGCACTTCCAACTACTGAAGAGGCTCAGAAATTCATGTCCAGCAATAAACCCAATTAA 984 0.4136 MSVSNDPLVISFGEMLIDFVPDKSGVSLAESYAFIKAPGGAPANVACAVSKLGGNAAFIGKVGDDEFGKMLADILKKNGVNTNGVSFDKEARTALAFVTLRSDGEREFMFYRNPSADMLLKESDLKMDLIKQAKIFHYGSISLISEPCRSAHMAAMKAAREAGALLSYDPNVRLPLWPSAEAARSGIKSIWNEADFIKVSDDEVEFLTQKDPQNEEAVMSLWHDKLKLLLVTDGEKGCRYITKKFKGKVGGFSVKAVDTTGAGDSFVGAVLKAAAKDPSIFDDEPKLKEALLFANACGAMCTTQKGAIPALPTTEEAQKFMSSNKPN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1722 327 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 258 271 IPR002173 GO:0016773
Tpr1g1722 327 PANTHER HEXOKINASE FAMILY MEMBER 4 324 - -
Tpr1g1722 327 Pfam pfkB family carbohydrate kinase 8 313 IPR011611 -
Tpr1g1722 327 Gene3D - 5 326 IPR029056 -
Tpr1g1722 327 SUPERFAMILY Ribokinase-like 9 321 IPR029056 -
Tpr1g1722 327 PANTHER FRUCTOKINASE-5-RELATED 4 324 - -
Tpr1g1722 327 CDD bac_FRK 8 308 - -
Tpr1g1722 327 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 39 63 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1722 Tpr-Chr1 16508767 16511696 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1722 K00847 - gmx:100775586 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1722 1 16508767 16511696 Tpr1g1722 1 16508767 16511696 ECH