Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1721 ATGAAAGAAACGGTTGCAACAACTTGTTTGCAATATCATTGCTTAACATTTTGTGTCTTAGAAAAATTCCCATTTGGCCTCGACAAAAACGATCCGTCTATTTCACTGTCACCTCGTAGAATAGACTGGAAGGAAACAACAGACGAACATGTTATAACGTTGGACGTGCCGGGGTTAAGAAAAGATGAGATAAAGATAGAAGTAGAAGAGAATGGAGTGGTGAGAGTAAGTGGTGAAAGGAAGAAAGAAGAAGAAAAAAAAGGTGATCATTGGCATAGAGTTGAAAGAACTTATGGAAAATTCTGGAGACAAGTTAGATTGCCTGAAAATGTTGATTTGGATTCTGTTAAAGCTAAGATTGAAAATGGTGTTCTTACTTTAACACTTAATAAGTTGTCACATGATAAGATGAAAGGTCCTAGAGTTGTTAGCATTGTTGAGGAGGATGAGTTATAG 456 0.364 MKETVATTCLQYHCLTFCVLEKFPFGLDKNDPSISLSPRRIDWKETTDEHVITLDVPGLRKDEIKIEVEENGVVRVSGERKKEEEKKGDHWHRVERTYGKFWRQVRLPENVDLDSVKAKIENGVLTLTLNKLSHDKMKGPRVVSIVEEDEL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1721 151 SUPERFAMILY HSP20-like chaperones 31 142 IPR008978 -
Tpr1g1721 151 Pfam Hsp20/alpha crystallin family 42 145 IPR002068 -
Tpr1g1721 151 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 31 148 IPR002068 -
Tpr1g1721 151 CDD ACD_ScHsp26_like 40 131 - -
Tpr1g1721 151 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 16 147 - -
Tpr1g1721 151 ProSiteProfiles CS domain profile. 36 143 IPR007052 -
Tpr1g1721 151 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 16 147 - -
Tpr1g1721 151 Gene3D - 20 145 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1721 Tpr-Chr1 16507857 16508617 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1721 K13993 - gmx:100500319 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1721 1 16507857 16508617 Tpr1g1721 1 16507857 16508617 ECH