Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1695 ATGGCTTCATCTTCATGTTGCGGAAGTTTTCTCTCAAATGTGGATCGTTTTGTTCTTAGTGTTACTCCAGATGTTCCTTCTCACAATCTTGATCTTCAGAGTTGTTCTCATGAGCTAAATAGCCAATGGCTACCTCTTGGTAAGGACCCTGTTGAATGCTTTGCATTGAAAGATCTTTGGGGTTGCTATGAAAGATGGAGTGCAATGGGTGCTGGTACACCTATACTGTTGGGAAATGGTGATGCTTTGACGCAGTATTATGTTCCGTATCTATCTTCCATCCAAATCTACACCAATAAGTCTGTTGCAGCTTCCAGGAATAGGAAAGAGGATATTGATGCAGCTGAATTTGAATTTGATTCATGGAGTGAAGATGATAGTGGATCAAGTGATAACCTATCTAGATCGGTAAGTAACAATTCTAGTAAGGCATGGGATGCTAATTCCTTGGATTCAAGCTCCGACCAAATGGGTTCGTGGCCAACCAGGGATATGCTTGGATATCTTTACTTACAGTACACCGAGACTTCACCACCTTCGTCGAGGGTTCCATTCGCTGAGAAGATAACCGAGCTAGCTAAAAGTCATCCAGCATTGATCACATTGAAATGTGTGGATGTTTCTCCGGCAAGTTGGATGGCTGTTGCATGGTACCCTATTTATTGCATACCAAATCATCAGCCAAGTGAAAAGGAGCTCTCGGCATGCTTTCTCACTTACCATACACTGTCATCATCTTTCCAAGATTGTAAAAACAAGTATGATGATATTGACATAGGGAAAGACATAAGTTGTTATGAGGAATGGGAAGGCGTGGGAAAGAAAAGCAAGGCAAACAAGAGTGGTGTTATGTCTCTGTCGCCTTTTGGGATGGCTAGTTACAAAATGCAGAAACCTTTTTGGTCAAGCTCTTCAGAATCTGGTAATGAAAGGATGTTAGACATGTACAGTGCCGCAGACTCGTGGTTGAAGCAACTCAACGTTCACCACCATGACTTCAACTATTTCACCCTCCGAACTCCTTTGTAA 1029 0.4227 MASSSCCGSFLSNVDRFVLSVTPDVPSHNLDLQSCSHELNSQWLPLGKDPVECFALKDLWGCYERWSAMGAGTPILLGNGDALTQYYVPYLSSIQIYTNKSVAASRNRKEDIDAAEFEFDSWSEDDSGSSDNLSRSVSNNSSKAWDANSLDSSSDQMGSWPTRDMLGYLYLQYTETSPPSSRVPFAEKITELAKSHPALITLKCVDVSPASWMAVAWYPIYCIPNHQPSEKELSACFLTYHTLSSSFQDCKNKYDDIDIGKDISCYEEWEGVGKKSKANKSGVMSLSPFGMASYKMQKPFWSSSSESGNERMLDMYSAADSWLKQLNVHHHDFNYFTLRTPL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1695 342 PANTHER T15D22.8 10 339 - -
Tpr1g1695 342 Pfam Protein of unknown function (DUF789) 12 336 IPR008507 -
Tpr1g1695 342 PANTHER PLANT/F9H3-4 PROTEIN 10 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1695 Tpr-Chr1 16194331 16198904 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1695 - - gmx:100811743 396.356