Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1686 ATGGGCTGCATCGTGTCCTCACCAAAGGATTCTGGTGGAAATAGAAGGAGGCCGGGGAGTATTGGAGATGTTTCTGTCTATATTCCCGGTCTGAGAATTCCTAAACCTGTTGATTTTACGCAGTCACTTGGTGATTATTTGTCGAAGAGCATAGTGGAACGCTTATCTGCTCTTAGAACTCGTATAGTTGTAATGGCTGGCCAAGAAGGTCCTACAATTACAAGAACAAAAAGAAAAAGTGCAACTCAACATGGAGGCTCAACACTAGCTGATCTTCTACAAGCTCTTGAAGACTACTTACCAGTACTTTTGGGATTAGTAAAAGATGGAAGTCATTTACAATACAAAGTACAATTTGTTTGGGTGAATCAAGAAGATGAGGCAGAGGAAACAGCCATGTCTAATGCATGGTATGAAGTGTTATCAGTCTTGCACTTGATGGCAACACTATTGCTATCACAGGCTAATTTATTACTTCTTCCAAGAACATCCACCGATGGTTATCAGCCAAAAGTATCAGAAGAAAATCGACGAGCCTCTGTTGATATCTTCTTAAAGTCGGCTGGATATCTTGATTGTGCTGTCAGGCATGTTCTTCCACAGTTGCCTGCTGAGCTCAGGAGAAATTTACCGGTAGACCTTGCGGAAGGAGTTCTTCGAGCACTTTGTCTACAAACATTGGGACAGGGTGTAGATATCCAACTTGGAATGGCAATTGATAGCACCAAAGCCACTCTTGCGGTAAAGCGAAGACTTGCATGTGAGATGGTGAAATATTGGCAACAGGCTCAAGATAATATTATGAACCTTCCGTTAGCGAATGGTTGGGGTGAAAAACACCGTCTTTATGTCAAATGGAAGTATATTGAATCAAAGGCTGCTGCATATTATTATCATGGTTTGATTCTTGATGAGGGGAATACAGAGAAATCTCATGGGATGGCTGTAGCTGCGCTGCAAGCAGCGGATGAGTATTTCAAAGAAAGTAAGAAGCTTTGTGAGGCATTCAATGCTGCAACTCCATTATCAAGAAATCCACCACTTTGGGGAACAATGAAATATCTCTCTGAGAAAATTCCCAAGGATACGTCAAGCAAGGTGCGAGTAAACCGTGATCTATACACTCCGGAGAGAATCATGGAAACAGCACCAACATTACCAGATTTTGCATTGGCCTTGAAACCAGATGATTATCAACTTCCACAAGTGAGTCCCTCTTGGAGTACAGAAAATGTGAAGGGGGGATCCCCTAATCATCTCAAGGGATGA 1269 0.4232 MGCIVSSPKDSGGNRRRPGSIGDVSVYIPGLRIPKPVDFTQSLGDYLSKSIVERLSALRTRIVVMAGQEGPTITRTKRKSATQHGGSTLADLLQALEDYLPVLLGLVKDGSHLQYKVQFVWVNQEDEAEETAMSNAWYEVLSVLHLMATLLLSQANLLLLPRTSTDGYQPKVSEENRRASVDIFLKSAGYLDCAVRHVLPQLPAELRRNLPVDLAEGVLRALCLQTLGQGVDIQLGMAIDSTKATLAVKRRLACEMVKYWQQAQDNIMNLPLANGWGEKHRLYVKWKYIESKAAAYYYHGLILDEGNTEKSHGMAVAALQAADEYFKESKKLCEAFNAATPLSRNPPLWGTMKYLSEKIPKDTSSKVRVNRDLYTPERIMETAPTLPDFALALKPDDYQLPQVSPSWSTENVKGGSPNHLKG* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1686 422 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g1686 422 PANTHER UNCHARACTERIZED 1 416 IPR038898 -
Tpr1g1686 422 SMART BRO1_2 25 403 IPR004328 -
Tpr1g1686 422 ProSiteProfiles BRO1 domain profile. 25 422 IPR004328 -
Tpr1g1686 422 Pfam BRO1-like domain 35 332 IPR004328 -
Tpr1g1686 422 CDD BRO1_Alix_like 23 400 - -
Tpr1g1686 422 Gene3D alix/aip1 like domains 34 414 IPR038499 -
Tpr1g1686 422 MobiDBLite consensus disorder prediction 402 422 - -
Tpr1g1686 422 PANTHER ENDOSOMAL TARGETING BRO1-LIKE DOMAIN PROTEIN 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1686 Tpr-Chr1 16100345 16107721 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1686 - - gmx:100781733 764.992