Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1668 ATGATTTCTCCAACAAGTCCACTAAACATACACATGGATTTTGAAGAGAAAAAAATGGAAATTGAAAGAGATATTAATCAGAATATGGAAGATAAGTTACCTGTGTTAGGTTCTGAAACAATCCAAGCTGAGGAACATTGGACAGAACATATAACAGTTAGAGGATTGTTTGTGAGTATGATGATTGGAATAATCTATAGTATAATTGCAATGAAGCTGAATCTTACAACAGGAATGGTTCCAAATTTGAATGTATCTGCTGCTTTACTTGCTTTTGTGTTTATAAGAAGTTGGACTAAAGTTCTTGAAAAAGCTGGCTTTGTTTCTAAGCCATTCACTCGCCAAGAAAATACCATCATTCAGACTTGTGCTGTTGCTTGCTATAGCATTGCTGTTAGTGGAGGATTTGCTTCTTATCTGTTGGGATTAAACAGGAAGACATATGTGTTGTCTGGAATAGGCATTGAGGGTAACAATCCAAACGCAGTTAAAGATCCTGCATTTGGTTGGATGTCTGGTTTCCTTTTTGTGGTTTGCTTTGTTGGACTCTTTGTATTAATTCCACTCAGAAAGAAACTGATAGTTGACCTCAACTTGCCTTATCCAAGTGGCTTGGCAACAGCGGTTCTGATCAATGGTTTTCATACACAGGATGACAAAATGGCCAAGAAGCAAGTCCATGGTTTCATGAAGTATTTTTCCATCAGTTTCTTATGGGGTTTCTTCAAGTGGTTCTTCTCAGGCAAAGAGGATTGTGGATTTGAACAGTTCCCAACTTTTGGACTGCAAGCTTGGAAGCAAACATTCTATTTCGACTTTAGCACGACTTTTGTGGGAGCTGGTATGATTTGCTCCCACCTTGTCAACTTGTCTTTGCTCCTTGGAGCTGTGATCTCTTTTGGAGTCATTTATCCGCTGGTCGACCGGCTTAAAGGAAATTGGTATCCTGACAACTTAGAAGAAACTAACATGAAGGGTTTATATGGTTATAAGGTTTTTCTATCAATTGCTCTAATCCTTGGTGATGGTGTATATACTTTTACCAAGATTCTATTTTCAAGTGTTCTTAGCTTTCATGAAAGAATCAAGAGCAAGAACCATAAAAATGAACTAGGTGTTGATCGGCATGGGAATCCAACTGGCGACCTTAAACAAGGACAAACATTCTTGAAGGAGAGCATTCCAATGTGGATCGCAGTAGTTGGATATGGTGTTTTCACAACCATTTCGATAATTATAATCCCGCACATGTTTCCTCAGCTGAAATGGTACTACATCATTGTTGCTTACATATTTGCACCGGCTCTTGCATTCTGCAATGCTTTTGGAGCAGGTCTCACTGATATAAACATGGCATATAACTACGGGAAAGTTGCACTATTTTTGCTGGCAACAGTGACAGGAAAAGAGAATGGTGTAGTGGCAGGACTTGTGGGGTGTGGTCTCATTAAATCTGTGATCTCAGTGTCTTGCAATCTGATGCAAGATTTCAAAACTGCTCATTGCACACGTACCTCTCCCAGGGCAATGTTCATATGCCAAGTAGTTGGCACTGCAATGGGGTGTGTATGCTGCCCTCTGAGCTTCTTCCTGTTCTACAAAGCATTTGATGTGGGAAACCCGCATGGAGAATTCAAAGCCCCTTATGCACTAATTTACAGAAACATGGCAGTTATCGGCGTTCAAGGTTTCTCAGCACTACCCCAACATTGCTTGCAACTTTGTTTTGGGTTCTTTGCTTTTGCAATAGGAACAAACATGTTAAGAGATTTGTTGCCCAAAAAGATTGGGAAATGGATGCCATTACCGATCGTCATGGCTGTACCGTTCCTGGTAGGGGCATACTTTGCAATTGATATGTGCATGGGTAGTTTGGTTGTGTTCCTGTTGCACAAACTTAACACCAAGAAAGCAGAGTTGATGGTTCCAGCAATTGCCTCTGGACTAATTTGCGGGGAAGGACTATGGACTCTTCCTGCTGCTATTCTTGCACTTGCGAAAATTAATCCACCTATCTGCATGAAATTTGTTACTTCTTAA 2040 0.4029 MISPTSPLNIHMDFEEKKMEIERDINQNMEDKLPVLGSETIQAEEHWTEHITVRGLFVSMMIGIIYSIIAMKLNLTTGMVPNLNVSAALLAFVFIRSWTKVLEKAGFVSKPFTRQENTIIQTCAVACYSIAVSGGFASYLLGLNRKTYVLSGIGIEGNNPNAVKDPAFGWMSGFLFVVCFVGLFVLIPLRKKLIVDLNLPYPSGLATAVLINGFHTQDDKMAKKQVHGFMKYFSISFLWGFFKWFFSGKEDCGFEQFPTFGLQAWKQTFYFDFSTTFVGAGMICSHLVNLSLLLGAVISFGVIYPLVDRLKGNWYPDNLEETNMKGLYGYKVFLSIALILGDGVYTFTKILFSSVLSFHERIKSKNHKNELGVDRHGNPTGDLKQGQTFLKESIPMWIAVVGYGVFTTISIIIIPHMFPQLKWYYIIVAYIFAPALAFCNAFGAGLTDINMAYNYGKVALFLLATVTGKENGVVAGLVGCGLIKSVISVSCNLMQDFKTAHCTRTSPRAMFICQVVGTAMGCVCCPLSFFLFYKAFDVGNPHGEFKAPYALIYRNMAVIGVQGFSALPQHCLQLCFGFFAFAIGTNMLRDLLPKKIGKWMPLPIVMAVPFLVGAYFAIDMCMGSLVVFLLHKLNTKKAELMVPAIASGLICGEGLWTLPAAILALAKINPPICMKFVTS* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1668 679 Pfam OPT oligopeptide transporter protein 51 663 IPR004813 GO:0035673
Tpr1g1668 679 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 14 678 IPR045035 GO:0035673
Tpr1g1668 679 Coils Coil 12 32 - -
Tpr1g1668 679 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL1 14 678 - -
Tpr1g1668 679 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 44 664 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1668 Tpr-Chr1 15857720 15861775 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1668 - - gmx:100810191 1108.98