Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1667 ATGTCCGAACCAGAATCTCACAACGAACCGCAACCATCGCCGCCGGAACAAGAATCTCAGAACGGACTTCAACCATCACCGGAACCAGAATCTCAAAACGGACCACCACCAGCACCGGAACCCGAATCCGAAACTGAAACCAAACACGAACCTGATTCCCAACCGGAATCTGAACCAGTTGCAACGGAACAAGTTGAATCACAAGCGCAAACGGAATTGGAACCGGAATCTGGATCAAGACCCGATCCAGAAGTTAACGACGATGTAGATCTCAAGGAAACGGCGATTCATTCCAATGACGCTGATAACAATTCTTCACCTCATCCTCATTTGAAAAAAGATGAAGGAAGTCGAACTTTCACAATGAGAGAATTGTTACATGGATTGAAAAATGATTCTGAACATGAAAGGGAAGATGTTAGCTCTCCCTACAGCCAAGATAGTCAACATCAACAGCATACAGAACAGAACAATGCTGCTATGGATTTGATAAACAGTGTTGTAGGCGTTGATGAGGAGGGACGGTCCCGGCAAAGGATTCTTACATTTGCTGCCAAGAGGTATGCTGCTGCTATTGAGAGGAACCCTGAAGATTATGATGCGCTGTACAATTGGGCATTGGTACTTCAGGAAAGTGCGGATAATGTTAGTCCAGATTCCACTTCACCTTCTAAAGATGCTTTGCTTGAGGAAGCTTGCAAAAAATATGATGAGGCCACTCGCCTTTGTCCCACATTACATGATGCATACTACAATTGGGCAATAGCAATCTCTGATCGTGCAAAGATGCGAGGCCGCACAAAGGAAGCTGAAGAGCTATGGAAACAGGCAACAGGGAACTATGTTAAAGCAGTCCAGCTCAACTGGAACAGTCCTCAGGCACTTAATAACTGGGGACTTGCGCTTCAGGAACTCAGTGCCATTGTTCCTGCTCGAGAAAAGCAAAAAATTGTAAGAACAGCTATCAGCAAGTTCCGTGCAGCCATACAATTGCAATTTGATTTCCACCGGGCAATTTACAATCTTGGAACTGTTCTGTACGGATTAGCAGAGGACACTTTAAGAACAGGGGGATCAGTGAGTGCTCAAGAAGTTTCACCAAATGAATTGTACAGCCAATCTGCAATATATATTGCAGCTGCACATGCATTGAAACCAAACTATTCAGTTTATAGCAGTGCCTTGCGGTTGGTACGTTCTATGCTACCACTACCACAACTTAAAGTTGGATATTTAACTGCACCTCCTGCGGGGGCAATAGTTGCACCTCATAATGACTGGAAACGATCAGAATTCTTTTTGGATCATGAGAAGCTTCAGCAGGTGCCCAGAGGTGACCAAAAGCCAGTATCTCAAAGTCTCTCAACCAGATCAGGAGATGCCGTGCATGGAGATAAGAAGACTATCAAAGTAGATATAGCAGATATTGTTTCTGTATCAGCATGTGCTGATCTGACTTTACCACCTGGTGCTGGCCTCTGTATTGATACAGTTCACGGATCAGTTTACTTGGTTGCTGACTCGTGGGAATCATTGGATGGGTGGCTGGATGCAATTCGTTTAGTTTACACTATTTATGTGCGAGGCAAAAGTGATGTATTGGCGGGTATTATAACAGGATGA 1623 0.4449 MSEPESHNEPQPSPPEQESQNGLQPSPEPESQNGPPPAPEPESETETKHEPDSQPESEPVATEQVESQAQTELEPESGSRPDPEVNDDVDLKETAIHSNDADNNSSPHPHLKKDEGSRTFTMRELLHGLKNDSEHEREDVSSPYSQDSQHQQHTEQNNAAMDLINSVVGVDEEGRSRQRILTFAAKRYAAAIERNPEDYDALYNWALVLQESADNVSPDSTSPSKDALLEEACKKYDEATRLCPTLHDAYYNWAIAISDRAKMRGRTKEAEELWKQATGNYVKAVQLNWNSPQALNNWGLALQELSAIVPAREKQKIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGGSVSAQEVSPNELYSQSAIYIAAAHALKPNYSVYSSALRLVRSMLPLPQLKVGYLTAPPAGAIVAPHNDWKRSEFFLDHEKLQQVPRGDQKPVSQSLSTRSGDAVHGDKKTIKVDIADIVSVSACADLTLPPGAGLCIDTVHGSVYLVADSWESLDGWLDAIRLVYTIYVRGKSDVLAGIITG* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1667 540 PANTHER - 4 540 - -
Tpr1g1667 540 PANTHER PROTEIN HLB1 4 540 - -
Tpr1g1667 540 MobiDBLite consensus disorder prediction 57 75 - -
Tpr1g1667 540 MobiDBLite consensus disorder prediction 12 28 - -
Tpr1g1667 540 MobiDBLite consensus disorder prediction 77 97 - -
Tpr1g1667 540 Pfam Plant specific mitochondrial import receptor subunit TOM20 180 286 - -
Tpr1g1667 540 Pfam Plant specific mitochondrial import receptor subunit TOM20 293 347 - -
Tpr1g1667 540 MobiDBLite consensus disorder prediction 1 117 - -
Tpr1g1667 540 MobiDBLite consensus disorder prediction 130 155 - -
Tpr1g1667 540 MobiDBLite consensus disorder prediction 42 56 - -
Tpr1g1667 540 Gene3D Tetratricopeptide repeat domain 290 409 IPR011990 GO:0005515
Tpr1g1667 540 Gene3D Tetratricopeptide repeat domain 170 289 IPR011990 GO:0005515
Tpr1g1667 540 SUPERFAMILY TPR-like 184 307 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1667 - - gmx:100786164 842.032