Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1664 ATGCTAGAGAAAAAAGAAGAAAATACACAAGAACAAGAAATAATTATGAGTGTAATGGGAAAAACTAGATCCATTTTAACAATGAGTGGAAGATTTATGAATGAAGCAATAAGTTTCATAGTCTTTTGTTTACTTGACCTAGTCGATTTTACGCTATGTTTTCTCTTTAAATCGGTTGATATGTTAGTTGAATCCGAATGTAAACCGTGTTATTGTTCATCTTCGGCTAAAGAAGCAATAACAAGTGGTGGAAAGATCTTGGTTTCGGAGCATGGAGGTGAATCGAAAATTGTTTCACTTAGTTCAACTAAGTTACAATTGGAAGATATATCTGACACGCTTTATTCTCGTCCTTCGTTGGTTTCTGAGGTTTCGAGGTTAACTATGAACGAAATTAAAAAGTTTAAGTTAGAAGATCCTGTTCTTCATCAATCAAAAAGGAATAATTACTCGCGGTGTTCGAGTTTTACCGGGAATACTACTATTGTGGAAATGCTTCAAGGTAAAATTGGGAACCAAGATGTTCATCCTATTCCTAGATGGTCAGATTGTGATTGTAAAGAATGTTGTTCTTGGATTGATCCTTCTAGTAAACCTACATCTCTCTATGTTAAATCTCAATACCCTACCTCAGGTGAAGCAAAAGAAAATGTGTTGTTCATACATGGATTCATTTCATCATCCTTATTTTGGACAGAAACATTGTTCCCAAATTTTTCAAGTGTAGCAAAATCAAGTTATCGTTTATTTGCAGTTGATTTACTAGGTTTTGGGAATAGTCCTAAGCCTAATGAATCATTGTACACATTAAGGGAACACTTAGATATGATAGAGAAATCAGTTTTGGAGGCCCATAAAGTTCAATCATTCCATATTGTGGCCCATTCCTTGGGATCAATTTTAGCTTTAGCACTTGCAGCTAAATACCCTCAATCTGTTAAGTCAATTACTTTGATAGCACCACCTTACTATCCGGTACCTAAGGGTGAAGCACAACCTACACAATATGTGATGAGACAAATGGCCCCGAGGCGTGTGTTTCCGCCTTTGGCGCTCGGCTCGTCGTTGTTTTTTTGGTATGAACATATAACTAGGATGATTTGTTTCCTCATTTGCAAGAATCATCGTCTTTGGATATTTCTCGCCAGACTCATCACTAGAAACAGGGTGAGGACTTACTTGCTTGAAGGATTCTTTAGTCACACCCATAATGCAGCGTGGCATACACTACATAACATTATATGTGGAGCTGGTGCAAAAGTTGGATCATATTTGGAAACATTAAAAGGAAATCCAAATTGTAAAGTTACTATATTTCATGGTAAAGATGATTTGGTTATTCCTACTGATTGTAGCTATGATTTGAAGAAAAACTTTCCAAGTGCAACACTTAGAGTTATTGATGATAAAGATCATATAACTATTGTTGTTGGAAGACAAAAAGATTTTGCTAGAGAGTTGGAGGAGATTTGGAGCTCTACCAACAACAATAACTAG 1497 0.3594 MLEKKEENTQEQEIIMSVMGKTRSILTMSGRFMNEAISFIVFCLLDLVDFTLCFLFKSVDMLVESECKPCYCSSSAKEAITSGGKILVSEHGGESKIVSLSSTKLQLEDISDTLYSRPSLVSEVSRLTMNEIKKFKLEDPVLHQSKRNNYSRCSSFTGNTTIVEMLQGKIGNQDVHPIPRWSDCDCKECCSWIDPSSKPTSLYVKSQYPTSGEAKENVLFIHGFISSSLFWTETLFPNFSSVAKSSYRLFAVDLLGFGNSPKPNESLYTLREHLDMIEKSVLEAHKVQSFHIVAHSLGSILALALAAKYPQSVKSITLIAPPYYPVPKGEAQPTQYVMRQMAPRRVFPPLALGSSLFFWYEHITRMICFLICKNHRLWIFLARLITRNRVRTYLLEGFFSHTHNAAWHTLHNIICGAGAKVGSYLETLKGNPNCKVTIFHGKDDLVIPTDCSYDLKKNFPSATLRVIDDKDHITIVVGRQKDFARELEEIWSSTNNNN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1664 498 Gene3D alpha/beta hydrolase 198 491 IPR029058 -
Tpr1g1664 498 PRINTS Alpha/beta hydrolase fold signature 246 261 IPR000073 -
Tpr1g1664 498 PRINTS Alpha/beta hydrolase fold signature 292 305 IPR000073 -
Tpr1g1664 498 PRINTS Alpha/beta hydrolase fold signature 306 319 IPR000073 -
Tpr1g1664 498 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 3-RELATED 16 494 - -
Tpr1g1664 498 Pfam alpha/beta hydrolase fold 218 332 IPR000073 -
Tpr1g1664 498 PANTHER HYDROLASE 16 494 - -
Tpr1g1664 498 SUPERFAMILY alpha/beta-Hydrolases 208 488 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1664 Tpr-Chr1 15803787 15808442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1664 31 491 Acyl Lipid Metabolism Gene Families AT1G64670 55.532 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1664 - - gmx:100811400 736.487