Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1657 ATGGCAACTGTGACGGGATATTTTGCGTGCCTCAATTATCAGGGAAGATTAACAGAGTCTAAGCCTAAGATAACTACTTGTTTCAATAATAATAGTAATAAACAAGTGTTTACTTATGTTGGTTTGAGATCCCTCAACAAGCTGCACGTGCAAACAGTACGTGCTACTCCATCTTCTTCGATAACAACGAGTGATAAGAGTGAGAGTGATAAGTTTACTGAGAAAATATTAGGGTGTGGTGGAATGAATTTGGTGTTTATTGGAGCTGAAGTTGGACCTTGGAGTAAAACTGGTGGACTTGGTGATGTTCTTGGTGGTCTTCCACCTGTTTTAGCAGGAAATGGGCACCGTGTTATGACTGTGTCACCGCGTTATGACCAATACAAGGATGCATGGGATACTAATGTGGTGGTTGAGATCAAAGTTGGAGATAGAATTGAAACTGTGCGTTTCTTTCACTGTTACAAAAGAGGAGTTGATCGTGTTTTTGTGGATCACCCACTTTTTCTTGAAAAGGTGTGGGGGAAGACCGGATCAAAACTCTATGGTCCTAAAACTGGAATTGATTATAGAGATAATCAACTTAGATTCAGCTTATTGTGCCAGGCTGCACTTGAGGCACCGCGGGTTTTGAGCTTAAATAGCAGCAAATATTTCTCCGGACCATATGGCGAAGATATAGTCTTCATTGCCAATGATTGGCACACTGCTCTTCTTCCATGCTACTTGAAATCGATATACAAGTCTAGGGGGATTTACAAAAATGCGAAGGTAGCGTTTTGTATTCATAACATAGCCTACCAGGGAAGACATGCCTTTGCAGACTTCGATCTTCTCAATTTACCTGATGAATTCCGAAGCTCTTTCGACTTTATTGATGGGTACACTAAGCCCGTGAAGGGAAGGAAAATCAATTGGATGAAGGCCGGAATATTAGAATCCGACCGAGTGTTCACTGTAAGTCCACATTATGCCGAGGAACTTGTTTCTGGAGAAGACAGAGGTGTGGAATTGGACAATATCATTCGCTCAACTGGTATCACTGGTATTGTGAATGGCATGGATAATCGAGAGTGGAGTCCACAAACTGATAGATACATCGATGTACACTACGATGCAACAACTGTCACCGAAGCAAAATCTCTGTTGAAAGAAGCTCTTCAAGCAGAGGTTGGGTTGCCTGTTGACAGAAGTATCCCTTTGATAGGATTCATCGGAAGACTAGAAGAGCAGAAAGGTTCAGATATTCTTGTTGAAGCTATTGTGAAGTTCATTGACGAAGATGTTCAGATAATAGTTCTTGGAACTGGCAAAAAGATCATGGAGAAGCAAATTGAGGAGCTCGAGGTAACGTATCCTGGCAAGGCAATCGGGGTAGCAAAATTCAACGGCCCCTTGGCTCACAAAATAATTGCTGGAGCTGACTTTATAGTGATCCCAAGTAGATTTGAGCCTTGTGGTCTAGTTCAGTTGCATGCCATGCCATATGGAACGGTTCCCATAGTTTCCTCAACCGGTGGACTTGTTGACACTGTGAAAGAAGGTTATACAGGATTCCACGCCGGAGCATTCAACGTAGAGTGTGAAACTGTTGATCCAGATGATGTAGATAAGTTAGCAACAACAGTGAAGAGAGCCATTAAAACCTATGGTACACAAGCCATGAAAGAGATTATCCAGAACTGCATGGCCCAAGACTTTTCGTGGAAGGGACCGGCCAAACTTTGGGAGAAGGCGCTATTGAGCCTCGAGGTCGCAGGCAACGAACCTGGAATAGATGGCGAGGAGATTGCTCCACTTGCTAAGGAAAATGTGGCTACTCCTTGA 1827 0.4308 MATVTGYFACLNYQGRLTESKPKITTCFNNNSNKQVFTYVGLRSLNKLHVQTVRATPSSSITTSDKSESDKFTEKILGCGGMNLVFIGAEVGPWSKTGGLGDVLGGLPPVLAGNGHRVMTVSPRYDQYKDAWDTNVVVEIKVGDRIETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTGSKLYGPKTGIDYRDNQLRFSLLCQAALEAPRVLSLNSSKYFSGPYGEDIVFIANDWHTALLPCYLKSIYKSRGIYKNAKVAFCIHNIAYQGRHAFADFDLLNLPDEFRSSFDFIDGYTKPVKGRKINWMKAGILESDRVFTVSPHYAEELVSGEDRGVELDNIIRSTGITGIVNGMDNREWSPQTDRYIDVHYDATTVTEAKSLLKEALQAEVGLPVDRSIPLIGFIGRLEEQKGSDILVEAIVKFIDEDVQIIVLGTGKKIMEKQIEELEVTYPGKAIGVAKFNGPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHAGAFNVECETVDPDDVDKLATTVKRAIKTYGTQAMKEIIQNCMAQDFSWKGPAKLWEKALLSLEVAGNEPGIDGEEIAPLAKENVATP* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1657 608 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 81 578 - -
Tpr1g1657 608 CDD GT5_Glycogen_synthase_DULL1-like 83 578 - -
Tpr1g1657 608 Hamap Glycogen synthase [glgA]. 82 583 IPR011835 GO:0004373
Tpr1g1657 608 Gene3D Glycogen Phosphorylase B; 84 574 - -
Tpr1g1657 608 Pfam Starch synthase catalytic domain 84 343 IPR013534 -
Tpr1g1657 608 Gene3D Glycogen Phosphorylase B; 355 565 - -
Tpr1g1657 608 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 23 608 - -
Tpr1g1657 608 Pfam Glycosyl transferases group 1 400 525 IPR001296 GO:0016757
Tpr1g1657 608 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 82 581 IPR011835 GO:0004373
Tpr1g1657 608 PANTHER GRANULE-BOUND STARCH SYNTHASE 23 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1657 Tpr-Chr1 15750887 15755544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1657 1 608 Glycosyltransferase AT1G32900 69.726 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1657 K13679 - gmx:100787590 977.622