Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1636 ATGAACTCTTACAATCGTCTTCTCTTACATCGCCTTGCTGAGATATTTGGGTTTGCACATGAATCTGCTGGTGGAGGAGAATATCGTCATTTGATTCTGGAGAGACGTCCAGATACATCTATACCTCCTATCCTTGTTAGCGATATCCTAGGGACGTACGATGAACCTCAATCTTTGGTTACATCACACCAAATATTACGGAGAAAAGAAGCCTCTCCTGTTTCACAGACAAATACAGCATCCATTCAGCAGACACTGGAGGAACGAAAAGCGGCTTATTTACTTGCTCGTGAGCGGGTTGTTTCTATGAATTTGGAAGAGGCAAAAGAACCTTGTGAACAAAAGCCACGAACCGTGTCTGTGGTAGCCCGCCGAATGATTACGCATGCACTAGGTCAAAGAATCAACACAAAGAATCCGAATGAGTTGGTTAGTGATAGTATGAAGGATAGAATGCTCACGAATGAATTAAATGCTCAAGATAACAATAGTGAAAAGTCATATCCAACCGAAGATTATGAAGAGTCTTCACAAACAAGCAGAACAAGAAACACTGGCAGTTCTACTTCTATTGCAGCCTCACCGAAAAAGTGTGAGCAAAGTGGAAGTGATCAAAAACCAGTTAACAAAGATTCGCCACCATTGTCTCGAGATGGGAAACAAGGGGAAAGTGTGAGTAAGGAATACATGAAAAGGGAGCACTTGGGAGCTGCAAAGAGAATGTTTGCTCATGCTTTGGGAGTACACTCTGGGAAGGATAGTTCTGTTCCTAGAAGTAGAAAAATTCAAAAAATGGAAGACAGAGAATATTTGTAG 816 0.4167 MNSYNRLLLHRLAEIFGFAHESAGGGEYRHLILERRPDTSIPPILVSDILGTYDEPQSLVTSHQILRRKEASPVSQTNTASIQQTLEERKAAYLLARERVVSMNLEEAKEPCEQKPRTVSVVARRMITHALGQRINTKNPNELVSDSMKDRMLTNELNAQDNNSEKSYPTEDYEESSQTSRTRNTGSSTSIAASPKKCEQSGSDQKPVNKDSPPLSRDGKQGESVSKEYMKREHLGAAKRMFAHALGVHSGKDSSVPRSRKIQKMEDREYL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1636 271 ProSiteProfiles R3H domain profile. 1 37 IPR001374 GO:0003676
Tpr1g1636 271 CDD R3H 1 35 - -
Tpr1g1636 271 MobiDBLite consensus disorder prediction 211 239 - -
Tpr1g1636 271 MobiDBLite consensus disorder prediction 156 271 - -
Tpr1g1636 271 Pfam R3H domain 1 34 IPR001374 GO:0003676
Tpr1g1636 271 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 1 258 - -
Tpr1g1636 271 MobiDBLite consensus disorder prediction 254 271 - -
Tpr1g1636 271 PANTHER RNA-BINDING SUPPRESSOR OF PAS KINASE PROTEIN 1 1 258 - -
Tpr1g1636 271 Gene3D - 1 72 IPR036867 GO:0003676
Tpr1g1636 271 SUPERFAMILY R3H domain 1 69 IPR036867 GO:0003676
Tpr1g1636 271 MobiDBLite consensus disorder prediction 179 210 - -
Tpr1g1636 271 Pfam SUZ domain 64 100 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1636 Tpr-Chr1 15454430 15456577 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1636 - - gmx:100801478 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1636 1 15454430 15456577 Tpr1g1636 1 15454430 15456577 ECH