Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1629 ATGGTGGTTATTATGCAAGAACAACAAGAAGCTGTTGAATTTCACGATCTACCTGAAGGTTGTATTGAAAACGTTCTCTCATTCACAACACCTCGTGATGTTGCTAGACTCTCTTTGGTTTCATCAACTTTCAGATCCGCCGCTCAATCTGATTCCGTTTGGGATAAATTCTTACCGTCTGATTATCGTTCCATAATTTCTCAATGTGATGAAGAAATTGATAATTCCTTATATGTTTTATCGAAGAAGGATCTTTATGTTAATCTTACTCAGAAACCGATTCTTATTGATGATGGTAAAAAGAGTTTTCAATTGGATAAAGTTGATGGGAAGAAATGCTATATGTTATCGGCGAGGAGTTTGTTTATTGTTTGGGGAGATACTCCTAGGTATTGGAAGTGGATTTCTGTTCCAGATTCAAGGTTTTCTCAGGTGGCTGAACTGGTGAGTGTGTGTTGGTTTGAAATCCGGGGCTGGATCAACACTAGCATGCTATCTCCAAACACTTTGTATGGAGTATACCTTGTATTTAAGGCAAGTACTTCTCGTACCTATGGGTTTGAATATCAGCCATGTGAAGCCTCCATCCTCATTGCTGGAGGTGGAGGTGATCCTGTTGTTGAGAGAAATGTATTCTTGGATGCTGAAAGAGGAAGAAGGTTAAGATATCAGATTGTTCCTCGCCGCCGAACTGGGATATTCAGTCGTTATTTGGAACCGCCCCCGCCACCGCAGGTAGAACAAACTGAAAGTGTGGATGATCTCCAGAAGTATCCAAAGGAGAGAACAGATGGGTGGTTGGAGATGGAATTGGGAGAGTATTTCAACGAAGGAGGAGATGATAAAGAGGTGGAAATAAGTGTTTGTGAGGTTAAGGGTGGTGGTTGGAAGGGTGGCCTTGTTCTTCAAGGAATTGAAATAAAGCCTAAGCCTAAATCATGCTGA 945 0.4127 MVVIMQEQQEAVEFHDLPEGCIENVLSFTTPRDVARLSLVSSTFRSAAQSDSVWDKFLPSDYRSIISQCDEEIDNSLYVLSKKDLYVNLTQKPILIDDGKKSFQLDKVDGKKCYMLSARSLFIVWGDTPRYWKWISVPDSRFSQVAELVSVCWFEIRGWINTSMLSPNTLYGVYLVFKASTSRTYGFEYQPCEASILIAGGGGDPVVERNVFLDAERGRRLRYQIVPRRRTGIFSRYLEPPPPPQVEQTESVDDLQKYPKERTDGWLEMELGEYFNEGGDDKEVEISVCEVKGGGWKGGLVLQGIEIKPKPKSC* 315
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1629 314 Pfam Phloem protein 2 111 309 IPR025886 -
Tpr1g1629 314 ProSiteProfiles F-box domain profile. 11 57 IPR001810 GO:0005515
Tpr1g1629 314 PANTHER - 12 309 - -
Tpr1g1629 314 SMART fbox_2 17 57 IPR001810 GO:0005515
Tpr1g1629 314 SUPERFAMILY F-box domain 14 118 IPR036047 GO:0005515
Tpr1g1629 314 PANTHER - 12 309 - -
Tpr1g1629 314 Pfam F-box domain 14 55 IPR001810 GO:0005515
Tpr1g1629 314 Gene3D - 6 57 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr1g1629 Tpr-Chr1 15396287 15399649 Dispersed/Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1629 - - gmx:121174316 405.601